Protein–RNA interactions for Protein: Q08003

RFU1, Regulator of free ubiquitin chains 1, yeastyeast

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RFU1Q08003 IMG2YCR071C 441 nt2.36□□□□□ -2.03
RFU1Q08003 AI5_BETAQ0075 1065 nt2.36□□□□□ -2.03
RFU1Q08003 GRX2YDR513W 432 nt2.36□□□□□ -2.03
RFU1Q08003 YGR293CYGR293C 462 nt2.36□□□□□ -2.03
RFU1Q08003 YIL174WYIL174W 228 nt2.36□□□□□ -2.03
RFU1Q08003 YJL222W-AYJL222W-A 228 nt2.36□□□□□ -2.03
RFU1Q08003 YLL037WYLL037W 381 nt2.36□□□□□ -2.03
RFU1Q08003 YML037CYML037C 1023 nt2.36□□□□□ -2.03
RFU1Q08003 YNL184CYNL184C 327 nt2.36□□□□□ -2.03
RFU1Q08003 HUB1YNR032C-A 222 nt2.36□□□□□ -2.03
RFU1Q08003 SHE3YBR130C 1278 nt2.36□□□□□ -2.03
RFU1Q08003 PHO2YDL106C 1680 nt2.36□□□□□ -2.03
RFU1Q08003 TMA64YDR117C 1698 nt2.36□□□□□ -2.03
RFU1Q08003 MNT3YIL014W 1893 nt2.36□□□□□ -2.03
RFU1Q08003 YPR148CYPR148C 1308 nt2.36□□□□□ -2.03
RFU1Q08003 YGR067CYGR067C 2415 nt2.36□□□□□ -2.03
RFU1Q08003 RPO41YFL036W 4056 nt2.35□□□□□ -2.03
RFU1Q08003 PRP18YGR006W 756 nt2.35□□□□□ -2.03
RFU1Q08003 SPO12YHR152W 522 nt2.35□□□□□ -2.03
RFU1Q08003 YLR339CYLR339C 552 nt2.35□□□□□ -2.03
RFU1Q08003 RNY1YPL123C 1305 nt2.35□□□□□ -2.03
RFU1Q08003 RTT10YPL183C 3042 nt2.35□□□□□ -2.03
RFU1Q08003 YHR078WYHR078W 1659 nt2.34□□□□□ -2.03
RFU1Q08003 PEX6YNL329C 3093 nt2.34□□□□□ -2.03
RFU1Q08003 YKL100CYKL100C 1764 nt2.34□□□□□ -2.03
RFU1Q08003 tC(GCA)BtC(GCA)B 72 nt2.34□□□□□ -2.03
RFU1Q08003 tC(GCA)GtC(GCA)G 72 nt2.34□□□□□ -2.03
RFU1Q08003 tC(GCA)P1tC(GCA)P1 72 nt2.34□□□□□ -2.03
RFU1Q08003 tC(GCA)P2tC(GCA)P2 72 nt2.34□□□□□ -2.03
RFU1Q08003 TDA8YAL064C-A 381 nt2.34□□□□□ -2.03
RFU1Q08003 COA4YLR218C 453 nt2.34□□□□□ -2.03
RFU1Q08003 POS5YPL188W 1245 nt2.34□□□□□ -2.03
RFU1Q08003 SPH1YLR313C 1593 nt2.34□□□□□ -2.03
RFU1Q08003 PSD2YGR170W 3417 nt2.34□□□□□ -2.04
RFU1Q08003 GCD10YNL062C 1437 nt2.34□□□□□ -2.04
RFU1Q08003 YCG1YDR325W 3108 nt2.33□□□□□ -2.04
RFU1Q08003 RLI1YDR091C 1827 nt2.33□□□□□ -2.04
RFU1Q08003 SEC26YDR238C 2922 nt2.33□□□□□ -2.04
RFU1Q08003 YCR045W-AYCR045W-A 351 nt2.33□□□□□ -2.04
RFU1Q08003 DOS2YDR068W 933 nt2.33□□□□□ -2.04
RFU1Q08003 RPS12YOR369C 432 nt2.33□□□□□ -2.04
RFU1Q08003 ATP3YBR039W 936 nt2.33□□□□□ -2.04
RFU1Q08003 YGL176CYGL176C 1665 nt2.33□□□□□ -2.04
RFU1Q08003 YDR098C-AYDR098C-A 1323 nt2.33□□□□□ -2.04
RFU1Q08003 YDR210C-CYDR210C-C 1323 nt2.33□□□□□ -2.04
RFU1Q08003 YDR261C-CYDR261C-C 1323 nt2.33□□□□□ -2.04
RFU1Q08003 YDR316W-AYDR316W-A 1323 nt2.33□□□□□ -2.04
RFU1Q08003 YDR365W-AYDR365W-A 1323 nt2.33□□□□□ -2.04
RFU1Q08003 YER137C-AYER137C-A 1323 nt2.33□□□□□ -2.04
RFU1Q08003 YER159C-AYER159C-A 1323 nt2.33□□□□□ -2.04
RFU1Q08003 YGR027W-AYGR027W-A 1323 nt2.33□□□□□ -2.04
RFU1Q08003 YGR038C-AYGR038C-A 1323 nt2.33□□□□□ -2.04
RFU1Q08003 YGR161C-CYGR161C-C 1323 nt2.33□□□□□ -2.04
RFU1Q08003 YJR026WYJR026W 1323 nt2.33□□□□□ -2.04
RFU1Q08003 YJR028WYJR028W 1323 nt2.33□□□□□ -2.04
RFU1Q08003 YAR010CYAR010C 1323 nt2.33□□□□□ -2.04
RFU1Q08003 YLR157C-AYLR157C-A 1323 nt2.33□□□□□ -2.04
RFU1Q08003 YLR227W-AYLR227W-A 1323 nt2.33□□□□□ -2.04
RFU1Q08003 YLR256W-AYLR256W-A 1323 nt2.33□□□□□ -2.04
RFU1Q08003 YML040WYML040W 1323 nt2.33□□□□□ -2.04
RFU1Q08003 YML045W-AYML045W-A 1323 nt2.33□□□□□ -2.04
RFU1Q08003 YMR051CYMR051C 1323 nt2.33□□□□□ -2.04
RFU1Q08003 YNL054W-AYNL054W-A 1323 nt2.33□□□□□ -2.04
RFU1Q08003 YOL103W-AYOL103W-A 1323 nt2.33□□□□□ -2.04
RFU1Q08003 YPL257W-AYPL257W-A 1323 nt2.33□□□□□ -2.04
RFU1Q08003 YPR137C-AYPR137C-A 1323 nt2.33□□□□□ -2.04
RFU1Q08003 YPR158C-CYPR158C-C 1323 nt2.33□□□□□ -2.04
RFU1Q08003 AI2Q0055 2565 nt2.33□□□□□ -2.04
RFU1Q08003 KRE33YNL132W 3171 nt2.33□□□□□ -2.04
RFU1Q08003 YEF3YLR249W 3135 nt2.32□□□□□ -2.04
RFU1Q08003 AXL1YPR122W 3627 nt2.32□□□□□ -2.04
RFU1Q08003 YPL150WYPL150W 2706 nt2.32□□□□□ -2.04
RFU1Q08003 YHL006W-AYHL006W-A 354 nt2.32□□□□□ -2.04
RFU1Q08003 YJL028WYJL028W 336 nt2.32□□□□□ -2.04
RFU1Q08003 RPS22AYJL190C 393 nt2.32□□□□□ -2.04
RFU1Q08003 MBB1YJL199C 327 nt2.32□□□□□ -2.04
RFU1Q08003 TTI2YJR136C 1266 nt2.32□□□□□ -2.04
RFU1Q08003 DAD2YKR083C 402 nt2.32□□□□□ -2.04
RFU1Q08003 JIP3YLR331C 378 nt2.32□□□□□ -2.04
RFU1Q08003 YMR310CYMR310C 954 nt2.32□□□□□ -2.04
RFU1Q08003 CNS1YBR155W 1158 nt2.32□□□□□ -2.04
RFU1Q08003 KEL2YGR238C 2649 nt2.32□□□□□ -2.04
RFU1Q08003 TRS130YMR218C 3309 nt2.32□□□□□ -2.04
RFU1Q08003 YKR078WYKR078W 1758 nt2.31□□□□□ -2.04
RFU1Q08003 GIN4YDR507C 3429 nt2.31□□□□□ -2.04
RFU1Q08003 FAR11YNL127W 2862 nt2.31□□□□□ -2.04
RFU1Q08003 YER079C-AYER079C-A 339 nt2.31□□□□□ -2.04
RFU1Q08003 YLR076CYLR076C 423 nt2.31□□□□□ -2.04
RFU1Q08003 RPS29AYLR388W 171 nt2.31□□□□□ -2.04
RFU1Q08003 HNT3YOR258W 654 nt2.31□□□□□ -2.04
RFU1Q08003 GYL1YMR192W 2163 nt2.31□□□□□ -2.04
RFU1Q08003 YBR138CYBR138C 1575 nt2.31□□□□□ -2.04
RFU1Q08003 SLP1YOR154W 1764 nt2.31□□□□□ -2.04
RFU1Q08003 EAP1YKL204W 1899 nt2.31□□□□□ -2.04
RFU1Q08003 VHR1YIL056W 1923 nt2.3□□□□□ -2.04
RFU1Q08003 BNR1YIL159W 4128 nt2.3□□□□□ -2.04
RFU1Q08003 SPO77YLR341W 1434 nt2.3□□□□□ -2.04
RFU1Q08003 TPO5YKL174C 1857 nt2.3□□□□□ -2.04
RFU1Q08003 YDR034C-DYDR034C-D 5313 nt2.29□□□□□ -2.04
RFU1Q08003 YIL092WYIL092W 1902 nt2.29□□□□□ -2.04
Retrieved 100 of 7,029 protein–RNA pairs in 19.5 ms