Protein–RNA interactions for Protein: P54860

UFD2, E4 ubiquitin-protein ligase UFD2, yeastyeast

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD2P54860 YGR039WYGR039W 312 nt5.11□□□□□ -1.59
UFD2P54860 YHL049CYHL049C 816 nt5.11□□□□□ -1.59
UFD2P54860 YIL177W-AYIL177W-A 483 nt5.11□□□□□ -1.59
UFD2P54860 YJL225W-AYJL225W-A 483 nt5.11□□□□□ -1.59
UFD2P54860 BNA1YJR025C 534 nt5.11□□□□□ -1.59
UFD2P54860 YJR085CYJR085C 318 nt5.11□□□□□ -1.59
UFD2P54860 YLR297WYLR297W 390 nt5.11□□□□□ -1.59
UFD2P54860 YPL077CYPL077C 723 nt5.11□□□□□ -1.59
UFD2P54860 THI20YOL055C 1656 nt5.11□□□□□ -1.59
UFD2P54860 DSN1YIR010W 1731 nt5.11□□□□□ -1.59
UFD2P54860 IMA1YGR287C 1770 nt5.11□□□□□ -1.59
UFD2P54860 LYP1YNL268W 1836 nt5.11□□□□□ -1.59
UFD2P54860 HNT2YDR305C 654 nt5.1□□□□□ -1.59
UFD2P54860 GOS1YHL031C 672 nt5.1□□□□□ -1.59
UFD2P54860 VHR1YIL056W 1923 nt5.1□□□□□ -1.59
UFD2P54860 YLL044WYLL044W 447 nt5.1□□□□□ -1.59
UFD2P54860 SEC39YLR440C 2130 nt5.1□□□□□ -1.59
UFD2P54860 STV1YMR054W 2673 nt5.1□□□□□ -1.59
UFD2P54860 YMR087WYMR087W 855 nt5.1□□□□□ -1.59
UFD2P54860 WHI3YNL197C 1986 nt5.1□□□□□ -1.59
UFD2P54860 MET12YPL023C 1974 nt5.1□□□□□ -1.59
UFD2P54860 TFB2YPL122C 1542 nt5.1□□□□□ -1.59
UFD2P54860 PXA1YPL147W 2613 nt5.1□□□□□ -1.59
UFD2P54860 YER079WYER079W 633 nt5.09□□□□□ -1.59
UFD2P54860 GRX4YER174C 735 nt5.09□□□□□ -1.59
UFD2P54860 SAE2YGL175C 1038 nt5.09□□□□□ -1.59
UFD2P54860 RSM25YIL093C 795 nt5.09□□□□□ -1.59
UFD2P54860 TPM2YIL138C 486 nt5.09□□□□□ -1.59
UFD2P54860 RPL17BYJL177W 555 nt5.09□□□□□ -1.59
UFD2P54860 YAL047W-AYAL047W-A 330 nt5.09□□□□□ -1.59
UFD2P54860 PBI2YNL015W 228 nt5.09□□□□□ -1.59
UFD2P54860 YOR248WYOR248W 303 nt5.09□□□□□ -1.59
UFD2P54860 MPS3YJL019W 2049 nt5.09□□□□□ -1.6
UFD2P54860 ASI3YNL008C 2031 nt5.09□□□□□ -1.6
UFD2P54860 SWC3YAL011W 1878 nt5.09□□□□□ -1.6
UFD2P54860 RMR1YGL250W 726 nt5.08□□□□□ -1.6
UFD2P54860 COX18YGR062C 951 nt5.08□□□□□ -1.6
UFD2P54860 YML099W-AYML099W-A 330 nt5.08□□□□□ -1.6
UFD2P54860 RPL15BYMR121C 615 nt5.08□□□□□ -1.6
UFD2P54860 GPI15YNL038W 690 nt5.08□□□□□ -1.6
UFD2P54860 YGR125WYGR125W 3111 nt5.08□□□□□ -1.6
UFD2P54860 ACK1YDL203C 1872 nt5.07□□□□□ -1.6
UFD2P54860 ATG31YDR022C 591 nt5.07□□□□□ -1.6
UFD2P54860 YDR545C-AYDR545C-A 480 nt5.07□□□□□ -1.6
UFD2P54860 YEL077W-AYEL077W-A 483 nt5.07□□□□□ -1.6
UFD2P54860 CHZ1YER030W 462 nt5.07□□□□□ -1.6
UFD2P54860 YER190C-BYER190C-B 483 nt5.07□□□□□ -1.6
UFD2P54860 YFL068WYFL068W 483 nt5.07□□□□□ -1.6
UFD2P54860 YGR296C-BYGR296C-B 483 nt5.07□□□□□ -1.6
UFD2P54860 YHL050W-AYHL050W-A 483 nt5.07□□□□□ -1.6
UFD2P54860 YHR219C-AYHR219C-A 483 nt5.07□□□□□ -1.6
UFD2P54860 CFD1YIL003W 882 nt5.07□□□□□ -1.6
UFD2P54860 YLL066W-AYLL066W-A 483 nt5.07□□□□□ -1.6
UFD2P54860 YLL067W-AYLL067W-A 483 nt5.07□□□□□ -1.6
UFD2P54860 RFU1YLR073C 603 nt5.07□□□□□ -1.6
UFD2P54860 YLR466C-AYLR466C-A 483 nt5.07□□□□□ -1.6
UFD2P54860 YLR467C-AYLR467C-A 483 nt5.07□□□□□ -1.6
UFD2P54860 YML133W-BYML133W-B 483 nt5.07□□□□□ -1.6
UFD2P54860 RPL18BYNL301C 561 nt5.07□□□□□ -1.6
UFD2P54860 YNL339W-BYNL339W-B 483 nt5.07□□□□□ -1.6
UFD2P54860 YBL113W-AYBL113W-A 483 nt5.07□□□□□ -1.6
UFD2P54860 YOR396C-AYOR396C-A 483 nt5.07□□□□□ -1.6
UFD2P54860 YPL283W-BYPL283W-B 483 nt5.07□□□□□ -1.6
UFD2P54860 YPR204C-AYPR204C-A 483 nt5.07□□□□□ -1.6
UFD2P54860 KEX1YGL203C 2190 nt5.06□□□□□ -1.6
UFD2P54860 MDM34YGL219C 1380 nt5.06□□□□□ -1.6
UFD2P54860 PEX29YDR479C 1665 nt5.06□□□□□ -1.6
UFD2P54860 HUL4YJR036C 2679 nt5.06□□□□□ -1.6
UFD2P54860 HLR1YDR528W 1272 nt5.06□□□□□ -1.6
UFD2P54860 YER034WYER034W 558 nt5.06□□□□□ -1.6
UFD2P54860 YER087C-AYER087C-A 552 nt5.06□□□□□ -1.6
UFD2P54860 GET1YGL020C 708 nt5.06□□□□□ -1.6
UFD2P54860 YHR138CYHR138C 345 nt5.06□□□□□ -1.6
UFD2P54860 PIR1YKL164C 1026 nt5.06□□□□□ -1.6
UFD2P54860 YRA2YKL214C 612 nt5.06□□□□□ -1.6
UFD2P54860 SDO1YLR022C 753 nt5.06□□□□□ -1.6
UFD2P54860 RDN58-1RDN58-1 158 nt5.06□□□□□ -1.6
UFD2P54860 RDN58-2RDN58-2 158 nt5.06□□□□□ -1.6
UFD2P54860 YNL276CYNL276C 396 nt5.06□□□□□ -1.6
UFD2P54860 POP3YNL282W 588 nt5.06□□□□□ -1.6
UFD2P54860 MRPS9YBR146W 837 nt5.06□□□□□ -1.6
UFD2P54860 VID22YLR373C 2706 nt5.06□□□□□ -1.6
UFD2P54860 FRE1YLR214W 2061 nt5.06□□□□□ -1.6
UFD2P54860 FUS2YMR232W 2034 nt5.06□□□□□ -1.6
UFD2P54860 YLR152CYLR152C 1731 nt5.06□□□□□ -1.6
UFD2P54860 PGM2YMR105C 1710 nt5.06□□□□□ -1.6
UFD2P54860 CRT10YOL063C 2874 nt5.06□□□□□ -1.6
UFD2P54860 PAH1YMR165C 2589 nt5.06□□□□□ -1.6
UFD2P54860 SKO1YNL167C 1944 nt5.05□□□□□ -1.6
UFD2P54860 GSY1YFR015C 2127 nt5.05□□□□□ -1.6
UFD2P54860 BLM10YFL007W 6432 nt5.05□□□□□ -1.6
UFD2P54860 GPP2YER062C 753 nt5.05□□□□□ -1.6
UFD2P54860 IES3YLR052W 753 nt5.05□□□□□ -1.6
UFD2P54860 SEC22YLR268W 645 nt5.05□□□□□ -1.6
UFD2P54860 YMR153C-AYMR153C-A 336 nt5.05□□□□□ -1.6
UFD2P54860 CAT5YOR125C 702 nt5.05□□□□□ -1.6
UFD2P54860 YOR199WYOR199W 330 nt5.05□□□□□ -1.6
UFD2P54860 SPN1YPR133C 1233 nt5.05□□□□□ -1.6
UFD2P54860 THI7YLR237W 1797 nt5.05□□□□□ -1.6
UFD2P54860 GYP6YJL044C 1377 nt5.04□□□□□ -1.6
Retrieved 100 of 7,029 protein–RNA pairs in 22.8 ms