Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
EPHA4P54764 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
EPHA4P54764 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
EPHA4P54764 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
EPHA4P54764 AC092053.2-201ENST00000640557 1818 ntBASIC20.48■□□□□ 0.87
EPHA4P54764 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
EPHA4P54764 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
EPHA4P54764 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
EPHA4P54764 GPX1P1-201ENST00000388829 606 ntBASIC20.48■□□□□ 0.87
EPHA4P54764 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
EPHA4P54764 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.48■□□□□ 0.87
EPHA4P54764 AC005181.1-201ENST00000604782 1256 ntBASIC20.48■□□□□ 0.87
EPHA4P54764 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.48■□□□□ 0.87
EPHA4P54764 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
EPHA4P54764 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
EPHA4P54764 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
EPHA4P54764 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
EPHA4P54764 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
EPHA4P54764 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
EPHA4P54764 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.47■□□□□ 0.87
EPHA4P54764 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.47■□□□□ 0.87
EPHA4P54764 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.47■□□□□ 0.87
EPHA4P54764 AL109923.1-201ENST00000618799 583 ntBASIC20.47■□□□□ 0.87
EPHA4P54764 AC013268.1-206ENST00000638368 961 ntBASIC20.47■□□□□ 0.87
EPHA4P54764 AC112229.1-201ENST00000639295 961 ntBASIC20.47■□□□□ 0.87
EPHA4P54764 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
EPHA4P54764 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.47■□□□□ 0.87
EPHA4P54764 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
EPHA4P54764 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
EPHA4P54764 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
EPHA4P54764 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
EPHA4P54764 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.46■□□□□ 0.87
EPHA4P54764 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
EPHA4P54764 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.46■□□□□ 0.87
EPHA4P54764 AL121832.2-201ENST00000610979 668 ntBASIC20.46■□□□□ 0.87
EPHA4P54764 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
EPHA4P54764 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
EPHA4P54764 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
EPHA4P54764 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.46■□□□□ 0.87
EPHA4P54764 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.46■□□□□ 0.87
EPHA4P54764 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
EPHA4P54764 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
EPHA4P54764 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.45■□□□□ 0.86
EPHA4P54764 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
EPHA4P54764 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.45■□□□□ 0.86
EPHA4P54764 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
EPHA4P54764 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
EPHA4P54764 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.45■□□□□ 0.86
EPHA4P54764 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
EPHA4P54764 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
EPHA4P54764 CNN2P6-201ENST00000439038 900 ntBASIC20.45■□□□□ 0.86
EPHA4P54764 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.45■□□□□ 0.86
EPHA4P54764 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.45■□□□□ 0.86
EPHA4P54764 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.45■□□□□ 0.86
EPHA4P54764 AL050303.2-201ENST00000619798 666 ntBASIC20.45■□□□□ 0.86
EPHA4P54764 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
EPHA4P54764 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
EPHA4P54764 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.45■□□□□ 0.86
EPHA4P54764 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
EPHA4P54764 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
EPHA4P54764 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
EPHA4P54764 TERF1P5-201ENST00000477545 1207 ntBASIC20.44■□□□□ 0.86
EPHA4P54764 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.44■□□□□ 0.86
EPHA4P54764 SLC7A5P2-201ENST00000553010 536 ntBASIC20.44■□□□□ 0.86
EPHA4P54764 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.44■□□□□ 0.86
EPHA4P54764 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.44■□□□□ 0.86
EPHA4P54764 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
EPHA4P54764 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
EPHA4P54764 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
EPHA4P54764 C1orf229-201ENST00000623686 2258 ntBASIC20.43■□□□□ 0.86
EPHA4P54764 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
EPHA4P54764 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
EPHA4P54764 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.43■□□□□ 0.86
EPHA4P54764 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
EPHA4P54764 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
EPHA4P54764 AC007322.4-201ENST00000509611 723 ntBASIC20.43■□□□□ 0.86
EPHA4P54764 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.43■□□□□ 0.86
EPHA4P54764 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
EPHA4P54764 KRT16P2-201ENST00000414673 1423 ntBASIC20.43■□□□□ 0.86
EPHA4P54764 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
EPHA4P54764 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.42■□□□□ 0.86
EPHA4P54764 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.42■□□□□ 0.86
EPHA4P54764 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
EPHA4P54764 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
EPHA4P54764 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
EPHA4P54764 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
EPHA4P54764 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
EPHA4P54764 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
EPHA4P54764 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
EPHA4P54764 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
EPHA4P54764 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
EPHA4P54764 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
EPHA4P54764 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.42■□□□□ 0.86
EPHA4P54764 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.42■□□□□ 0.86
EPHA4P54764 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.42■□□□□ 0.86
EPHA4P54764 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
EPHA4P54764 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.42■□□□□ 0.86
EPHA4P54764 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
EPHA4P54764 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
EPHA4P54764 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms