Protein–RNA interactions for Protein: P40968

CDC40, Pre-mRNA-processing factor 17, yeastyeast

Predicted RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC40P40968 YDL180WYDL180W 1644 nt2.82□□□□□ -1.96
CDC40P40968 EAP1YKL204W 1899 nt2.82□□□□□ -1.96
CDC40P40968 YDR210W-BYDR210W-B 5313 nt2.82□□□□□ -1.96
CDC40P40968 YDR261W-BYDR261W-B 5313 nt2.82□□□□□ -1.96
CDC40P40968 YFL002W-AYFL002W-A 5313 nt2.82□□□□□ -1.96
CDC40P40968 YGR161W-BYGR161W-B 5313 nt2.82□□□□□ -1.96
CDC40P40968 YLR410W-BYLR410W-B 5313 nt2.82□□□□□ -1.96
CDC40P40968 YCL019WYCL019W 5313 nt2.82□□□□□ -1.96
CDC40P40968 RMT2YDR465C 1239 nt2.82□□□□□ -1.96
CDC40P40968 RPL15AYLR029C 615 nt2.82□□□□□ -1.96
CDC40P40968 RFC3YNL290W 1023 nt2.82□□□□□ -1.96
CDC40P40968 RPN8YOR261C 1017 nt2.82□□□□□ -1.96
CDC40P40968 RPA43YOR340C 981 nt2.82□□□□□ -1.96
CDC40P40968 RET3YPL010W 570 nt2.82□□□□□ -1.96
CDC40P40968 DPB3YBR278W 606 nt2.82□□□□□ -1.96
CDC40P40968 KIN3YAR018C 1308 nt2.82□□□□□ -1.96
CDC40P40968 IPI3YNL182C 1668 nt2.82□□□□□ -1.96
CDC40P40968 PDC2YDR081C 2778 nt2.81□□□□□ -1.96
CDC40P40968 BMH2YDR099W 822 nt2.81□□□□□ -1.96
CDC40P40968 APA2YDR530C 978 nt2.81□□□□□ -1.96
CDC40P40968 COBQ0105 1158 nt2.81□□□□□ -1.96
CDC40P40968 YFL051CYFL051C 483 nt2.81□□□□□ -1.96
CDC40P40968 PPE1YHR075C 1203 nt2.81□□□□□ -1.96
CDC40P40968 CDC12YHR107C 1224 nt2.81□□□□□ -1.96
CDC40P40968 MMF1YIL051C 438 nt2.81□□□□□ -1.96
CDC40P40968 COQ5YML110C 924 nt2.81□□□□□ -1.96
CDC40P40968 YNL013CYNL013C 378 nt2.81□□□□□ -1.96
CDC40P40968 PBP2YBR233W 1242 nt2.81□□□□□ -1.96
CDC40P40968 AI4Q0065 1671 nt2.81□□□□□ -1.96
CDC40P40968 DSE1YER124C 1722 nt2.81□□□□□ -1.96
CDC40P40968 NDT80YHR124W 1884 nt2.81□□□□□ -1.96
CDC40P40968 YBR259WYBR259W 2067 nt2.81□□□□□ -1.96
CDC40P40968 ARO80YDR421W 2853 nt2.81□□□□□ -1.96
CDC40P40968 CDC45YLR103C 1953 nt2.8□□□□□ -1.96
CDC40P40968 TGL3YMR313C 1929 nt2.8□□□□□ -1.96
CDC40P40968 ARP9YMR033W 1404 nt2.8□□□□□ -1.96
CDC40P40968 YNR066CYNR066C 1311 nt2.8□□□□□ -1.96
CDC40P40968 TMA17YDL110C 453 nt2.8□□□□□ -1.96
CDC40P40968 FMN1YDR236C 657 nt2.8□□□□□ -1.96
CDC40P40968 MSW1YDR268W 1140 nt2.8□□□□□ -1.96
CDC40P40968 RPB9YGL070C 369 nt2.8□□□□□ -1.96
CDC40P40968 MOH1YBL049W 417 nt2.8□□□□□ -1.96
CDC40P40968 21S_rRNA21S_rRNA 3296 nt2.8□□□□□ -1.96
CDC40P40968 PTM1YKL039W 1572 nt2.79□□□□□ -1.96
CDC40P40968 CWH41YGL027C 2502 nt2.79□□□□□ -1.96
CDC40P40968 KIN4YOR233W 2403 nt2.79□□□□□ -1.96
CDC40P40968 HBT1YDL223C 3141 nt2.79□□□□□ -1.96
CDC40P40968 VTC4YJL012C 2166 nt2.79□□□□□ -1.96
CDC40P40968 YPR1YDR368W 939 nt2.79□□□□□ -1.96
CDC40P40968 IGO2YHR132W-A 396 nt2.79□□□□□ -1.96
CDC40P40968 LSM8YJR022W 330 nt2.79□□□□□ -1.96
CDC40P40968 SUB1YMR039C 879 nt2.79□□□□□ -1.96
CDC40P40968 BAG7YOR134W 1230 nt2.79□□□□□ -1.96
CDC40P40968 ICS2YBR157C 768 nt2.79□□□□□ -1.96
CDC40P40968 ERV15YBR210W 429 nt2.79□□□□□ -1.96
CDC40P40968 ATG26YLR189C 3597 nt2.79□□□□□ -1.96
CDC40P40968 FAR1YJL157C 2493 nt2.79□□□□□ -1.96
CDC40P40968 YCK2YNL154C 1641 nt2.79□□□□□ -1.96
CDC40P40968 VAS1YGR094W 3315 nt2.78□□□□□ -1.96
CDC40P40968 PUF6YDR496C 1971 nt2.78□□□□□ -1.96
CDC40P40968 SKO1YNL167C 1944 nt2.78□□□□□ -1.96
CDC40P40968 AVT5YBL089W 1380 nt2.78□□□□□ -1.96
CDC40P40968 SRP68YPL243W 1800 nt2.78□□□□□ -1.96
CDC40P40968 YFR032C-BYFR032C-B 264 nt2.78□□□□□ -1.96
CDC40P40968 UPF3YGR072W 1164 nt2.78□□□□□ -1.96
CDC40P40968 YGR168CYGR168C 1131 nt2.78□□□□□ -1.96
CDC40P40968 YKL162C-AYKL162C-A 153 nt2.78□□□□□ -1.96
CDC40P40968 YMR099CYMR099C 894 nt2.78□□□□□ -1.96
CDC40P40968 TPT1YOL102C 693 nt2.78□□□□□ -1.96
CDC40P40968 MCA1YOR197W 1299 nt2.78□□□□□ -1.96
CDC40P40968 SRL1YOR247W 633 nt2.78□□□□□ -1.96
CDC40P40968 PLP2YOR281C 861 nt2.78□□□□□ -1.96
CDC40P40968 RPL19AYBR084C-A 570 nt2.78□□□□□ -1.96
CDC40P40968 YBR201C-AYBR201C-A 204 nt2.78□□□□□ -1.96
CDC40P40968 DER1YBR201W 636 nt2.78□□□□□ -1.96
CDC40P40968 DOA4YDR069C 2781 nt2.78□□□□□ -1.96
CDC40P40968 MMS1YPR164W 4224 nt2.78□□□□□ -1.96
CDC40P40968 AUS1YOR011W 4185 nt2.78□□□□□ -1.96
CDC40P40968 MSD1YPL104W 1977 nt2.78□□□□□ -1.97
CDC40P40968 RRN6YBL014C 2685 nt2.77□□□□□ -1.97
CDC40P40968 SLY41YOR307C 1362 nt2.77□□□□□ -1.97
CDC40P40968 VPS33YLR396C 2076 nt2.77□□□□□ -1.97
CDC40P40968 SIN3YOL004W 4611 nt2.77□□□□□ -1.97
CDC40P40968 CWC2YDL209C 1020 nt2.77□□□□□ -1.97
CDC40P40968 YGR160WYGR160W 612 nt2.77□□□□□ -1.97
CDC40P40968 YAL034C-BYAL034C-B 354 nt2.77□□□□□ -1.97
CDC40P40968 YLR163W-AYLR163W-A 114 nt2.77□□□□□ -1.97
CDC40P40968 TSR4YOL022C 1227 nt2.77□□□□□ -1.97
CDC40P40968 LTP1YPR073C 486 nt2.77□□□□□ -1.97
CDC40P40968 MET6YER091C 2304 nt2.77□□□□□ -1.97
CDC40P40968 CHS3YBR023C 3498 nt2.77□□□□□ -1.97
CDC40P40968 ATP22YDR350C 2055 nt2.77□□□□□ -1.97
CDC40P40968 GCD2YGR083C 1956 nt2.76□□□□□ -1.97
CDC40P40968 YBL005W-BYBL005W-B 5268 nt2.76□□□□□ -1.97
CDC40P40968 RDS1YCR106W 2499 nt2.76□□□□□ -1.97
CDC40P40968 snR68snR68 136 nt2.76□□□□□ -1.97
CDC40P40968 CPR1YDR155C 489 nt2.76□□□□□ -1.97
CDC40P40968 IRC22YEL001C 678 nt2.76□□□□□ -1.97
CDC40P40968 RPL30YGL030W 318 nt2.76□□□□□ -1.97
CDC40P40968 NNF1YJR112W 606 nt2.76□□□□□ -1.97
Retrieved 100 of 7,029 protein–RNA pairs in 17 ms