Protein–RNA interactions for Protein: P39956

RPH1, DNA damage-responsive transcriptional repressor RPH1, yeastyeast

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPH1P39956 YPR158C-DYPR158C-D 5268 nt3.39□□□□□ -1.87
RPH1P39956 SMI1YGR229C 1518 nt3.39□□□□□ -1.87
RPH1P39956 URK1YNR012W 1506 nt3.39□□□□□ -1.87
RPH1P39956 AIM14YGL160W 1713 nt3.39□□□□□ -1.87
RPH1P39956 BUD6YLR319C 2367 nt3.38□□□□□ -1.87
RPH1P39956 YFR009W-AYFR009W-A 258 nt3.38□□□□□ -1.87
RPH1P39956 YGR226CYGR226C 210 nt3.38□□□□□ -1.87
RPH1P39956 RPL22AYLR061W 366 nt3.38□□□□□ -1.87
RPH1P39956 SHH3YMR118C 591 nt3.38□□□□□ -1.87
RPH1P39956 RFC3YNL290W 1023 nt3.38□□□□□ -1.87
RPH1P39956 CAF20YOR276W 486 nt3.38□□□□□ -1.87
RPH1P39956 RRG7YOR305W 729 nt3.38□□□□□ -1.87
RPH1P39956 YCL007CYCL007C 393 nt3.38□□□□□ -1.87
RPH1P39956 PRS5YOL061W 1491 nt3.38□□□□□ -1.87
RPH1P39956 MTH1YDR277C 1302 nt3.38□□□□□ -1.87
RPH1P39956 NUP85YJR042W 2235 nt3.38□□□□□ -1.87
RPH1P39956 ARP9YMR033W 1404 nt3.37□□□□□ -1.87
RPH1P39956 TAF1YGR274C 3201 nt3.37□□□□□ -1.87
RPH1P39956 YOR365CYOR365C 2112 nt3.37□□□□□ -1.87
RPH1P39956 RPS18AYDR450W 441 nt3.37□□□□□ -1.87
RPH1P39956 APA2YDR530C 978 nt3.37□□□□□ -1.87
RPH1P39956 PAU10YDR542W 363 nt3.37□□□□□ -1.87
RPH1P39956 MRM2YGL136C 963 nt3.37□□□□□ -1.87
RPH1P39956 PAU11YGL261C 363 nt3.37□□□□□ -1.87
RPH1P39956 YGR115CYGR115C 780 nt3.37□□□□□ -1.87
RPH1P39956 ERV29YGR284C 933 nt3.37□□□□□ -1.87
RPH1P39956 PAU13YHL046C 363 nt3.37□□□□□ -1.87
RPH1P39956 MMF1YIL051C 438 nt3.37□□□□□ -1.87
RPH1P39956 YAL064W-BYAL064W-B 381 nt3.37□□□□□ -1.87
RPH1P39956 YAL065CYAL065C 387 nt3.37□□□□□ -1.87
RPH1P39956 YLR217WYLR217W 324 nt3.37□□□□□ -1.87
RPH1P39956 RPS30AYLR287C-A 192 nt3.37□□□□□ -1.87
RPH1P39956 PAU4YLR461W 363 nt3.37□□□□□ -1.87
RPH1P39956 YMR122W-AYMR122W-A 255 nt3.37□□□□□ -1.87
RPH1P39956 DDP1YOR163W 567 nt3.37□□□□□ -1.87
RPH1P39956 MCT1YOR221C 1083 nt3.37□□□□□ -1.87
RPH1P39956 MDN1YLR106C 14733 nt3.37□□□□□ -1.87
RPH1P39956 SEA4YBL104C 3117 nt3.37□□□□□ -1.87
RPH1P39956 DSL1YNL258C 2265 nt3.36□□□□□ -1.87
RPH1P39956 NAT1YDL040C 2565 nt3.36□□□□□ -1.87
RPH1P39956 SHQ1YIL104C 1524 nt3.36□□□□□ -1.87
RPH1P39956 ATC1YDR184C 885 nt3.36□□□□□ -1.87
RPH1P39956 RAV2YDR202C 1056 nt3.36□□□□□ -1.87
RPH1P39956 GUK1YDR454C 564 nt3.36□□□□□ -1.87
RPH1P39956 ATP6Q0085 780 nt3.36□□□□□ -1.87
RPH1P39956 YKT6YKL196C 603 nt3.36□□□□□ -1.87
RPH1P39956 CTP1YBR291C 900 nt3.36□□□□□ -1.87
RPH1P39956 SPH1YLR313C 1593 nt3.36□□□□□ -1.87
RPH1P39956 ZDS2YML109W 2829 nt3.36□□□□□ -1.87
RPH1P39956 CUE3YGL110C 1875 nt3.35□□□□□ -1.87
RPH1P39956 tK(UUU)DtK(UUU)D 73 nt3.35□□□□□ -1.87
RPH1P39956 tK(UUU)G1tK(UUU)G1 73 nt3.35□□□□□ -1.87
RPH1P39956 tK(UUU)G2tK(UUU)G2 73 nt3.35□□□□□ -1.87
RPH1P39956 tK(UUU)KtK(UUU)K 73 nt3.35□□□□□ -1.87
RPH1P39956 tK(UUU)LtK(UUU)L 73 nt3.35□□□□□ -1.87
RPH1P39956 tK(UUU)OtK(UUU)O 73 nt3.35□□□□□ -1.87
RPH1P39956 tK(UUU)PtK(UUU)P 73 nt3.35□□□□□ -1.87
RPH1P39956 SCM4YGR049W 564 nt3.35□□□□□ -1.87
RPH1P39956 CCE1YKL011C 1062 nt3.35□□□□□ -1.87
RPH1P39956 GPX1YKL026C 504 nt3.35□□□□□ -1.87
RPH1P39956 ATG38YLR211C 681 nt3.35□□□□□ -1.87
RPH1P39956 TVP18YMR071C 504 nt3.35□□□□□ -1.87
RPH1P39956 YNL013CYNL013C 378 nt3.35□□□□□ -1.87
RPH1P39956 RPS7AYOR096W 573 nt3.35□□□□□ -1.87
RPH1P39956 FIG1YBR040W 897 nt3.35□□□□□ -1.87
RPH1P39956 SUR1YPL057C 1149 nt3.35□□□□□ -1.87
RPH1P39956 YPR108W-AYPR108W-A 213 nt3.35□□□□□ -1.87
RPH1P39956 MUD1YBR119W 897 nt3.35□□□□□ -1.87
RPH1P39956 TAO3YIL129C 7131 nt3.35□□□□□ -1.87
RPH1P39956 NRP1YDL167C 2160 nt3.35□□□□□ -1.87
RPH1P39956 CIT1YNR001C 1440 nt3.35□□□□□ -1.87
RPH1P39956 USE1YGL098W 738 nt3.34□□□□□ -1.87
RPH1P39956 CKA1YIL035C 1119 nt3.34□□□□□ -1.87
RPH1P39956 IST3YIR005W 447 nt3.34□□□□□ -1.87
RPH1P39956 YJL147CYJL147C 1149 nt3.34□□□□□ -1.87
RPH1P39956 REE1YJL217W 597 nt3.34□□□□□ -1.87
RPH1P39956 YPT52YKR014C 705 nt3.34□□□□□ -1.87
RPH1P39956 ILV5YLR355C 1188 nt3.34□□□□□ -1.87
RPH1P39956 YOL019W-AYOL019W-A 153 nt3.34□□□□□ -1.87
RPH1P39956 HUT1YPL244C 1020 nt3.34□□□□□ -1.87
RPH1P39956 YBR096WYBR096W 693 nt3.34□□□□□ -1.87
RPH1P39956 POP7YBR167C 423 nt3.34□□□□□ -1.87
RPH1P39956 RIB5YBR256C 717 nt3.34□□□□□ -1.87
RPH1P39956 MSS4YDR208W 2340 nt3.34□□□□□ -1.87
RPH1P39956 GPI1YGR216C 1830 nt3.34□□□□□ -1.87
RPH1P39956 AEP3YPL005W 1821 nt3.34□□□□□ -1.87
RPH1P39956 PFK26YIL107C 2484 nt3.34□□□□□ -1.88
RPH1P39956 FUN12YAL035W 3009 nt3.33□□□□□ -1.88
RPH1P39956 SEC6YIL068C 2418 nt3.33□□□□□ -1.88
RPH1P39956 PWP2YCR057C 2772 nt3.33□□□□□ -1.88
RPH1P39956 STE14YDR410C 720 nt3.33□□□□□ -1.88
RPH1P39956 RGI1YER067W 486 nt3.33□□□□□ -1.88
RPH1P39956 BCD1YHR040W 1101 nt3.33□□□□□ -1.88
RPH1P39956 MRPL16YBL038W 699 nt3.33□□□□□ -1.88
RPH1P39956 YPR147CYPR147C 915 nt3.33□□□□□ -1.88
RPH1P39956 YNL011CYNL011C 1335 nt3.33□□□□□ -1.88
RPH1P39956 TPD3YAL016W 1908 nt3.32□□□□□ -1.88
RPH1P39956 YDR355CYDR355C 303 nt3.32□□□□□ -1.88
RPH1P39956 PGD1YGL025C 1194 nt3.32□□□□□ -1.88
RPH1P39956 EFG1YGR271C-A 702 nt3.32□□□□□ -1.88
Retrieved 100 of 7,029 protein–RNA pairs in 106.9 ms