Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TOP3BO95985 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.69■■□□□ 1.06
TOP3BO95985 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TOP3BO95985 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
TOP3BO95985 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
TOP3BO95985 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TOP3BO95985 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.69■■□□□ 1.06
TOP3BO95985 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TOP3BO95985 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.69■■□□□ 1.06
TOP3BO95985 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TOP3BO95985 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TOP3BO95985 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TOP3BO95985 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
TOP3BO95985 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TOP3BO95985 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TOP3BO95985 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.68■■□□□ 1.06
TOP3BO95985 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.68■■□□□ 1.06
TOP3BO95985 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TOP3BO95985 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
TOP3BO95985 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TOP3BO95985 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TOP3BO95985 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.68■■□□□ 1.06
TOP3BO95985 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.68■■□□□ 1.06
TOP3BO95985 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TOP3BO95985 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
TOP3BO95985 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TOP3BO95985 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TOP3BO95985 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.67■■□□□ 1.06
TOP3BO95985 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.67■■□□□ 1.06
TOP3BO95985 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TOP3BO95985 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.67■■□□□ 1.06
TOP3BO95985 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TOP3BO95985 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
TOP3BO95985 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TOP3BO95985 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TOP3BO95985 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.67■■□□□ 1.06
TOP3BO95985 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.67■■□□□ 1.06
TOP3BO95985 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.67■■□□□ 1.06
TOP3BO95985 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
TOP3BO95985 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TOP3BO95985 AC005229.4-201ENST00000610085 2198 ntBASIC21.67■■□□□ 1.06
TOP3BO95985 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TOP3BO95985 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TOP3BO95985 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TOP3BO95985 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
TOP3BO95985 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
TOP3BO95985 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TOP3BO95985 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
TOP3BO95985 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
TOP3BO95985 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.66■■□□□ 1.06
TOP3BO95985 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TOP3BO95985 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TOP3BO95985 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
TOP3BO95985 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
TOP3BO95985 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
TOP3BO95985 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TOP3BO95985 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.65■■□□□ 1.06
TOP3BO95985 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.65■■□□□ 1.06
TOP3BO95985 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
TOP3BO95985 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
TOP3BO95985 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.65■■□□□ 1.06
TOP3BO95985 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TOP3BO95985 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.65■■□□□ 1.06
TOP3BO95985 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.65■■□□□ 1.06
TOP3BO95985 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.65■■□□□ 1.06
TOP3BO95985 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.65■■□□□ 1.06
TOP3BO95985 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.65■■□□□ 1.06
TOP3BO95985 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TOP3BO95985 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TOP3BO95985 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
TOP3BO95985 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.65■■□□□ 1.06
TOP3BO95985 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TOP3BO95985 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
TOP3BO95985 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TOP3BO95985 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
TOP3BO95985 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TOP3BO95985 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.64■■□□□ 1.05
TOP3BO95985 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TOP3BO95985 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.64■■□□□ 1.05
TOP3BO95985 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.64■■□□□ 1.05
TOP3BO95985 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.64■■□□□ 1.05
TOP3BO95985 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.64■■□□□ 1.05
TOP3BO95985 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.64■■□□□ 1.05
TOP3BO95985 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
TOP3BO95985 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TOP3BO95985 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TOP3BO95985 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.64■■□□□ 1.05
TOP3BO95985 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.64■■□□□ 1.05
TOP3BO95985 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TOP3BO95985 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.63■■□□□ 1.05
TOP3BO95985 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.63■■□□□ 1.05
TOP3BO95985 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
TOP3BO95985 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
TOP3BO95985 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TOP3BO95985 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.63■■□□□ 1.05
TOP3BO95985 NCF1B-203ENST00000435988 1254 ntBASIC21.63■■□□□ 1.05
TOP3BO95985 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.63■■□□□ 1.05
TOP3BO95985 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC21.63■■□□□ 1.05
TOP3BO95985 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC21.63■■□□□ 1.05
TOP3BO95985 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms