Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 RASA4CP-201ENST00000424092 1398 ntBASIC21.27■■□□□ 1
RFPL1O75677 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RFPL1O75677 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RFPL1O75677 SERBP1P1-201ENST00000396021 1160 ntBASIC21.27■■□□□ 1
RFPL1O75677 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
RFPL1O75677 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.27■■□□□ 1
RFPL1O75677 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.27■■□□□ 1
RFPL1O75677 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.27■■□□□ 1
RFPL1O75677 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.27■■□□□ 1
RFPL1O75677 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
RFPL1O75677 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.27■□□□□ 0.99
RFPL1O75677 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
RFPL1O75677 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
RFPL1O75677 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
RFPL1O75677 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RFPL1O75677 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.26■□□□□ 0.99
RFPL1O75677 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.26■□□□□ 0.99
RFPL1O75677 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
RFPL1O75677 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RFPL1O75677 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RFPL1O75677 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
RFPL1O75677 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RFPL1O75677 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.26■□□□□ 0.99
RFPL1O75677 AC097381.1-201ENST00000429019 1296 ntBASIC21.26■□□□□ 0.99
RFPL1O75677 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RFPL1O75677 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
RFPL1O75677 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.26■□□□□ 0.99
RFPL1O75677 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RFPL1O75677 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RFPL1O75677 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.26■□□□□ 0.99
RFPL1O75677 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.26■□□□□ 0.99
RFPL1O75677 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RFPL1O75677 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RFPL1O75677 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.25■□□□□ 0.99
RFPL1O75677 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
RFPL1O75677 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RFPL1O75677 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.25■□□□□ 0.99
RFPL1O75677 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.25■□□□□ 0.99
RFPL1O75677 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RFPL1O75677 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RFPL1O75677 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RFPL1O75677 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RFPL1O75677 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RFPL1O75677 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
RFPL1O75677 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.25■□□□□ 0.99
RFPL1O75677 AC010141.3-201ENST00000456659 717 ntBASIC21.25■□□□□ 0.99
RFPL1O75677 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.25■□□□□ 0.99
RFPL1O75677 AL138724.1-201ENST00000606771 1088 ntBASIC21.25■□□□□ 0.99
RFPL1O75677 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RFPL1O75677 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
RFPL1O75677 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.25■□□□□ 0.99
RFPL1O75677 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RFPL1O75677 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RFPL1O75677 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RFPL1O75677 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RFPL1O75677 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RFPL1O75677 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RFPL1O75677 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.24■□□□□ 0.99
RFPL1O75677 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
RFPL1O75677 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RFPL1O75677 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RFPL1O75677 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RFPL1O75677 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
RFPL1O75677 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RFPL1O75677 AC010525.1-201ENST00000585559 441 ntBASIC21.24■□□□□ 0.99
RFPL1O75677 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.24■□□□□ 0.99
RFPL1O75677 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
RFPL1O75677 AC011298.3-201ENST00000615796 283 ntBASIC21.24■□□□□ 0.99
RFPL1O75677 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RFPL1O75677 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RFPL1O75677 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RFPL1O75677 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.24■□□□□ 0.99
RFPL1O75677 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
RFPL1O75677 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RFPL1O75677 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RFPL1O75677 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RFPL1O75677 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.23■□□□□ 0.99
RFPL1O75677 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
RFPL1O75677 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.23■□□□□ 0.99
RFPL1O75677 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.23■□□□□ 0.99
RFPL1O75677 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
RFPL1O75677 LINC01521-201ENST00000504184 1943 ntBASIC21.23■□□□□ 0.99
RFPL1O75677 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
RFPL1O75677 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RFPL1O75677 OXCT2P1-201ENST00000447263 1535 ntBASIC21.23■□□□□ 0.99
RFPL1O75677 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RFPL1O75677 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RFPL1O75677 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
RFPL1O75677 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RFPL1O75677 AC087239.1-201ENST00000622671 572 ntBASIC21.22■□□□□ 0.99
RFPL1O75677 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RFPL1O75677 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RFPL1O75677 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.22■□□□□ 0.99
RFPL1O75677 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RFPL1O75677 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RFPL1O75677 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RFPL1O75677 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
RFPL1O75677 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RFPL1O75677 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RFPL1O75677 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms