Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC26.95■■□□□ 1.91
CACNA1FO60840 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
CACNA1FO60840 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
CACNA1FO60840 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC26.95■■□□□ 1.9
CACNA1FO60840 AC090192.1-201ENST00000517740 490 ntBASIC26.95■■□□□ 1.9
CACNA1FO60840 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
CACNA1FO60840 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC26.95■■□□□ 1.9
CACNA1FO60840 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
CACNA1FO60840 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC26.94■■□□□ 1.9
CACNA1FO60840 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC26.94■■□□□ 1.9
CACNA1FO60840 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
CACNA1FO60840 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CACNA1FO60840 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC26.94■■□□□ 1.9
CACNA1FO60840 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC26.93■■□□□ 1.9
CACNA1FO60840 PARP1-202ENST00000366792 553 ntTSL 3 BASIC26.93■■□□□ 1.9
CACNA1FO60840 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC26.93■■□□□ 1.9
CACNA1FO60840 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC26.93■■□□□ 1.9
CACNA1FO60840 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC26.93■■□□□ 1.9
CACNA1FO60840 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC26.93■■□□□ 1.9
CACNA1FO60840 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
CACNA1FO60840 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC26.93■■□□□ 1.9
CACNA1FO60840 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC26.93■■□□□ 1.9
CACNA1FO60840 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CACNA1FO60840 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
CACNA1FO60840 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CACNA1FO60840 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC26.92■■□□□ 1.9
CACNA1FO60840 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC26.92■■□□□ 1.9
CACNA1FO60840 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CACNA1FO60840 SPI1-203ENST00000533030 661 ntTSL 2 BASIC26.92■■□□□ 1.9
CACNA1FO60840 AP001160.3-201ENST00000601484 763 ntBASIC26.92■■□□□ 1.9
CACNA1FO60840 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC26.92■■□□□ 1.9
CACNA1FO60840 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC26.92■■□□□ 1.9
CACNA1FO60840 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
CACNA1FO60840 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
CACNA1FO60840 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC26.91■■□□□ 1.9
CACNA1FO60840 AC004911.1-201ENST00000416316 871 ntBASIC26.91■■□□□ 1.9
CACNA1FO60840 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC26.91■■□□□ 1.9
CACNA1FO60840 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC26.91■■□□□ 1.9
CACNA1FO60840 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC26.91■■□□□ 1.9
CACNA1FO60840 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
CACNA1FO60840 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC26.91■■□□□ 1.9
CACNA1FO60840 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC26.91■■□□□ 1.9
CACNA1FO60840 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC26.91■■□□□ 1.9
CACNA1FO60840 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
CACNA1FO60840 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC26.91■■□□□ 1.9
CACNA1FO60840 AC092666.2-201ENST00000613287 246 ntBASIC26.91■■□□□ 1.9
CACNA1FO60840 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC26.91■■□□□ 1.9
CACNA1FO60840 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CACNA1FO60840 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CACNA1FO60840 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
CACNA1FO60840 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC26.9■■□□□ 1.9
CACNA1FO60840 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC26.9■■□□□ 1.9
CACNA1FO60840 BID-214ENST00000617586 542 ntTSL 5 BASIC26.9■■□□□ 1.9
CACNA1FO60840 AC073111.5-205ENST00000641717 521 ntBASIC26.9■■□□□ 1.9
CACNA1FO60840 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CACNA1FO60840 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CACNA1FO60840 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CACNA1FO60840 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
CACNA1FO60840 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
CACNA1FO60840 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC26.89■■□□□ 1.9
CACNA1FO60840 AC013268.1-206ENST00000638368 961 ntBASIC26.89■■□□□ 1.9
CACNA1FO60840 AC112229.1-201ENST00000639295 961 ntBASIC26.89■■□□□ 1.9
CACNA1FO60840 AC061975.6-201ENST00000579045 1553 ntBASIC26.89■■□□□ 1.9
CACNA1FO60840 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC26.89■■□□□ 1.9
CACNA1FO60840 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
CACNA1FO60840 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
CACNA1FO60840 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
CACNA1FO60840 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC26.89■■□□□ 1.89
CACNA1FO60840 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC26.89■■□□□ 1.89
CACNA1FO60840 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC26.89■■□□□ 1.89
CACNA1FO60840 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC26.89■■□□□ 1.89
CACNA1FO60840 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC26.89■■□□□ 1.89
CACNA1FO60840 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
CACNA1FO60840 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC26.88■■□□□ 1.89
CACNA1FO60840 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
CACNA1FO60840 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CACNA1FO60840 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CACNA1FO60840 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
CACNA1FO60840 TUB-203ENST00000534099 1759 ntTSL 2 BASIC26.88■■□□□ 1.89
CACNA1FO60840 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CACNA1FO60840 AC007322.4-201ENST00000509611 723 ntBASIC26.88■■□□□ 1.89
CACNA1FO60840 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
CACNA1FO60840 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC26.87■■□□□ 1.89
CACNA1FO60840 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
CACNA1FO60840 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
CACNA1FO60840 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CACNA1FO60840 MIR663A-201ENST00000385250 93 ntBASIC26.87■■□□□ 1.89
CACNA1FO60840 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CACNA1FO60840 CD44-222ENST00000526025 1052 ntTSL 2 BASIC26.87■■□□□ 1.89
CACNA1FO60840 SLC7A5P2-201ENST00000553010 536 ntBASIC26.87■■□□□ 1.89
CACNA1FO60840 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC26.87■■□□□ 1.89
CACNA1FO60840 RARRES2P11-201ENST00000635158 484 ntBASIC26.87■■□□□ 1.89
CACNA1FO60840 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
CACNA1FO60840 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CACNA1FO60840 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC26.87■■□□□ 1.89
CACNA1FO60840 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
CACNA1FO60840 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC26.86■■□□□ 1.89
CACNA1FO60840 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CACNA1FO60840 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CACNA1FO60840 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC26.86■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms