Protein–RNA interactions for Protein: O60548

FOXD2, Forkhead box protein D2, humanhuman

Predicted RBP Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD2O60548 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.31■■□□□ 1
FOXD2O60548 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.31■■□□□ 1
FOXD2O60548 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.31■■□□□ 1
FOXD2O60548 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.31■■□□□ 1
FOXD2O60548 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.3■■□□□ 1
FOXD2O60548 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
FOXD2O60548 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
FOXD2O60548 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
FOXD2O60548 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
FOXD2O60548 ESRRAP1-201ENST00000400596 1257 ntBASIC21.3■■□□□ 1
FOXD2O60548 AL512625.2-201ENST00000417533 625 ntBASIC21.3■■□□□ 1
FOXD2O60548 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC21.3■■□□□ 1
FOXD2O60548 RARRES2P4-201ENST00000514074 484 ntBASIC21.3■■□□□ 1
FOXD2O60548 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.3■■□□□ 1
FOXD2O60548 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.3■■□□□ 1
FOXD2O60548 AC008694.1-202ENST00000636953 945 ntBASIC21.3■■□□□ 1
FOXD2O60548 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
FOXD2O60548 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
FOXD2O60548 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
FOXD2O60548 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
FOXD2O60548 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.29■■□□□ 1
FOXD2O60548 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
FOXD2O60548 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
FOXD2O60548 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.29■■□□□ 1
FOXD2O60548 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
FOXD2O60548 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.29■■□□□ 1
FOXD2O60548 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.29■■□□□ 1
FOXD2O60548 AC142381.4-202ENST00000563973 229 ntBASIC21.29■■□□□ 1
FOXD2O60548 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.29■■□□□ 1
FOXD2O60548 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.29■■□□□ 1
FOXD2O60548 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
FOXD2O60548 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
FOXD2O60548 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.29■■□□□ 1
FOXD2O60548 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.29■■□□□ 1
FOXD2O60548 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
FOXD2O60548 AP003733.4-201ENST00000623785 1697 ntBASIC21.28■■□□□ 1
FOXD2O60548 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.28■■□□□ 1
FOXD2O60548 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.28■■□□□ 1
FOXD2O60548 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.28■■□□□ 1
FOXD2O60548 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
FOXD2O60548 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.28■■□□□ 1
FOXD2O60548 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
FOXD2O60548 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.28■■□□□ 1
FOXD2O60548 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.28■■□□□ 1
FOXD2O60548 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.28■■□□□ 1
FOXD2O60548 C1orf229-201ENST00000623686 2258 ntBASIC21.27■■□□□ 1
FOXD2O60548 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.27■■□□□ 1
FOXD2O60548 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.27■■□□□ 1
FOXD2O60548 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.27■■□□□ 1
FOXD2O60548 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
FOXD2O60548 AL596275.1-201ENST00000423464 877 ntBASIC21.27■■□□□ 1
FOXD2O60548 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.27■■□□□ 1
FOXD2O60548 AC007322.4-201ENST00000509611 723 ntBASIC21.27■■□□□ 1
FOXD2O60548 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.27■■□□□ 1
FOXD2O60548 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC21.27■■□□□ 1
FOXD2O60548 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.27■■□□□ 1
FOXD2O60548 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.27■■□□□ 1
FOXD2O60548 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
FOXD2O60548 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
FOXD2O60548 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
FOXD2O60548 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
FOXD2O60548 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.26■□□□□ 0.99
FOXD2O60548 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.26■□□□□ 0.99
FOXD2O60548 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.26■□□□□ 0.99
FOXD2O60548 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
FOXD2O60548 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
FOXD2O60548 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.26■□□□□ 0.99
FOXD2O60548 AC007375.3-201ENST00000600936 2314 ntBASIC21.26■□□□□ 0.99
FOXD2O60548 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.26■□□□□ 0.99
FOXD2O60548 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
FOXD2O60548 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
FOXD2O60548 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.26■□□□□ 0.99
FOXD2O60548 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC21.26■□□□□ 0.99
FOXD2O60548 AL158047.1-201ENST00000445918 881 ntBASIC21.26■□□□□ 0.99
FOXD2O60548 AC097658.1-201ENST00000475555 843 ntBASIC21.26■□□□□ 0.99
FOXD2O60548 AC069236.1-201ENST00000604339 616 ntBASIC21.26■□□□□ 0.99
FOXD2O60548 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.26■□□□□ 0.99
FOXD2O60548 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.26■□□□□ 0.99
FOXD2O60548 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.26■□□□□ 0.99
FOXD2O60548 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
FOXD2O60548 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
FOXD2O60548 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
FOXD2O60548 AC004812.2-201ENST00000611079 2094 ntBASIC21.25■□□□□ 0.99
FOXD2O60548 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
FOXD2O60548 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
FOXD2O60548 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC21.25■□□□□ 0.99
FOXD2O60548 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.25■□□□□ 0.99
FOXD2O60548 AC010141.2-201ENST00000452426 721 ntBASIC21.25■□□□□ 0.99
FOXD2O60548 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.25■□□□□ 0.99
FOXD2O60548 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.25■□□□□ 0.99
FOXD2O60548 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.25■□□□□ 0.99
FOXD2O60548 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.25■□□□□ 0.99
FOXD2O60548 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
FOXD2O60548 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
FOXD2O60548 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
FOXD2O60548 AC004687.1-201ENST00000579003 1625 ntBASIC21.25■□□□□ 0.99
FOXD2O60548 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
FOXD2O60548 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
FOXD2O60548 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
FOXD2O60548 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms