Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 PKD1P6-201ENST00000343738 4769 ntBASIC20.23■□□□□ 0.83
RTCAO00442 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTCAO00442 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RTCAO00442 AL137060.1-201ENST00000618151 2648 ntBASIC20.23■□□□□ 0.83
RTCAO00442 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.22■□□□□ 0.83
RTCAO00442 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RTCAO00442 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RTCAO00442 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RTCAO00442 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RTCAO00442 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
RTCAO00442 Z98882.1-201ENST00000622160 2253 ntBASIC20.22■□□□□ 0.83
RTCAO00442 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.22■□□□□ 0.83
RTCAO00442 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.22■□□□□ 0.83
RTCAO00442 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RTCAO00442 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.22■□□□□ 0.83
RTCAO00442 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RTCAO00442 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RTCAO00442 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RTCAO00442 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
RTCAO00442 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RTCAO00442 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RTCAO00442 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RTCAO00442 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.22■□□□□ 0.83
RTCAO00442 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RTCAO00442 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
RTCAO00442 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.21■□□□□ 0.83
RTCAO00442 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.21■□□□□ 0.83
RTCAO00442 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RTCAO00442 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RTCAO00442 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RTCAO00442 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RTCAO00442 AC027612.3-201ENST00000413684 1047 ntBASIC20.21■□□□□ 0.83
RTCAO00442 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.21■□□□□ 0.83
RTCAO00442 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RTCAO00442 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.21■□□□□ 0.83
RTCAO00442 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RTCAO00442 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RTCAO00442 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RTCAO00442 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RTCAO00442 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RTCAO00442 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.2■□□□□ 0.82
RTCAO00442 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.2■□□□□ 0.82
RTCAO00442 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RTCAO00442 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.2■□□□□ 0.82
RTCAO00442 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.2■□□□□ 0.82
RTCAO00442 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RTCAO00442 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RTCAO00442 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.2■□□□□ 0.82
RTCAO00442 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
RTCAO00442 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.2■□□□□ 0.82
RTCAO00442 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
RTCAO00442 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RTCAO00442 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
RTCAO00442 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.19■□□□□ 0.82
RTCAO00442 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RTCAO00442 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RTCAO00442 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.19■□□□□ 0.82
RTCAO00442 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.19■□□□□ 0.82
RTCAO00442 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.19■□□□□ 0.82
RTCAO00442 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.19■□□□□ 0.82
RTCAO00442 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RTCAO00442 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RTCAO00442 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.19■□□□□ 0.82
RTCAO00442 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
RTCAO00442 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
RTCAO00442 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.19■□□□□ 0.82
RTCAO00442 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RTCAO00442 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RTCAO00442 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.18■□□□□ 0.82
RTCAO00442 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
RTCAO00442 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
RTCAO00442 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
RTCAO00442 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RTCAO00442 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.18■□□□□ 0.82
RTCAO00442 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
RTCAO00442 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.18■□□□□ 0.82
RTCAO00442 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RTCAO00442 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RTCAO00442 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
RTCAO00442 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
RTCAO00442 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RTCAO00442 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RTCAO00442 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
RTCAO00442 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.17■□□□□ 0.82
RTCAO00442 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RTCAO00442 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RTCAO00442 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
RTCAO00442 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
RTCAO00442 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.17■□□□□ 0.82
RTCAO00442 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.17■□□□□ 0.82
RTCAO00442 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RTCAO00442 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.17■□□□□ 0.82
RTCAO00442 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RTCAO00442 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.16■□□□□ 0.82
RTCAO00442 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RTCAO00442 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.16■□□□□ 0.82
RTCAO00442 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RTCAO00442 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.16■□□□□ 0.82
RTCAO00442 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.16■□□□□ 0.82
RTCAO00442 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms