Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC13.51□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC13.5□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Gm10602-201ENSMUST00000098239 609 ntBASIC13.5□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Trav13n-1A0A0G2JEU8 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC13.49□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13n-1A0A0G2JEU8 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13n-1A0A0G2JEU8 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Trav13n-1A0A0G2JEU8 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC13.48□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC13.47□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC13.47□□□□□ -0.25
Trav13n-1A0A0G2JEU8 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC13.47□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC13.47□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC13.46□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13n-1A0A0G2JEU8 CT010467.1-202ENSMUST00000205406 714 ntBASIC13.46□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC13.46□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Spcs1-207ENSMUST00000228767 1008 ntBASIC13.46□□□□□ -0.25
Trav13n-1A0A0G2JEU8 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13n-1A0A0G2JEU8 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav13n-1A0A0G2JEU8 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13n-1A0A0G2JEU8 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC13.45□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Gm12933-201ENSMUST00000120203 872 ntBASIC13.45□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13n-1A0A0G2JEU8 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms