Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 AC026271.2-201ENST00000428091 497 ntBASIC20.32■□□□□ 0.84
NECTIN3Q9NQS3 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.32■□□□□ 0.84
NECTIN3Q9NQS3 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
NECTIN3Q9NQS3 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.32■□□□□ 0.84
NECTIN3Q9NQS3 C11orf96-202ENST00000528572 1834 ntBASIC20.32■□□□□ 0.84
NECTIN3Q9NQS3 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
NECTIN3Q9NQS3 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
NECTIN3Q9NQS3 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NECTIN3Q9NQS3 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NECTIN3Q9NQS3 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NECTIN3Q9NQS3 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NECTIN3Q9NQS3 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.31■□□□□ 0.84
NECTIN3Q9NQS3 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NECTIN3Q9NQS3 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NECTIN3Q9NQS3 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.31■□□□□ 0.84
NECTIN3Q9NQS3 AC027612.3-201ENST00000413684 1047 ntBASIC20.31■□□□□ 0.84
NECTIN3Q9NQS3 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NECTIN3Q9NQS3 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.31■□□□□ 0.84
NECTIN3Q9NQS3 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
NECTIN3Q9NQS3 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.31■□□□□ 0.84
NECTIN3Q9NQS3 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
NECTIN3Q9NQS3 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NECTIN3Q9NQS3 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NECTIN3Q9NQS3 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.31■□□□□ 0.84
NECTIN3Q9NQS3 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
NECTIN3Q9NQS3 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NECTIN3Q9NQS3 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NECTIN3Q9NQS3 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.3■□□□□ 0.84
NECTIN3Q9NQS3 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NECTIN3Q9NQS3 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.3■□□□□ 0.84
NECTIN3Q9NQS3 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NECTIN3Q9NQS3 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.3■□□□□ 0.84
NECTIN3Q9NQS3 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NECTIN3Q9NQS3 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.3■□□□□ 0.84
NECTIN3Q9NQS3 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.3■□□□□ 0.84
NECTIN3Q9NQS3 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
NECTIN3Q9NQS3 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NECTIN3Q9NQS3 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.3■□□□□ 0.84
NECTIN3Q9NQS3 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
NECTIN3Q9NQS3 AC139530.1-201ENST00000575312 1977 ntBASIC20.3■□□□□ 0.84
NECTIN3Q9NQS3 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NECTIN3Q9NQS3 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NECTIN3Q9NQS3 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NECTIN3Q9NQS3 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
NECTIN3Q9NQS3 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.29■□□□□ 0.84
NECTIN3Q9NQS3 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NECTIN3Q9NQS3 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
NECTIN3Q9NQS3 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
NECTIN3Q9NQS3 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NECTIN3Q9NQS3 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.29■□□□□ 0.84
NECTIN3Q9NQS3 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NECTIN3Q9NQS3 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
NECTIN3Q9NQS3 AC080038.3-201ENST00000623346 1952 ntBASIC20.28■□□□□ 0.84
NECTIN3Q9NQS3 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.28■□□□□ 0.84
NECTIN3Q9NQS3 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
NECTIN3Q9NQS3 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NECTIN3Q9NQS3 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.28■□□□□ 0.84
NECTIN3Q9NQS3 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.28■□□□□ 0.84
NECTIN3Q9NQS3 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NECTIN3Q9NQS3 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.28■□□□□ 0.84
NECTIN3Q9NQS3 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.28■□□□□ 0.84
NECTIN3Q9NQS3 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NECTIN3Q9NQS3 MIR6821-201ENST00000617625 74 ntBASIC20.28■□□□□ 0.84
NECTIN3Q9NQS3 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.28■□□□□ 0.84
NECTIN3Q9NQS3 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NECTIN3Q9NQS3 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
NECTIN3Q9NQS3 OR7E47P-201ENST00000546390 1422 ntBASIC20.27■□□□□ 0.84
NECTIN3Q9NQS3 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
NECTIN3Q9NQS3 AC092053.2-201ENST00000640557 1818 ntBASIC20.27■□□□□ 0.84
NECTIN3Q9NQS3 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.27■□□□□ 0.84
NECTIN3Q9NQS3 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NECTIN3Q9NQS3 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
NECTIN3Q9NQS3 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
NECTIN3Q9NQS3 AC097381.1-201ENST00000429019 1296 ntBASIC20.27■□□□□ 0.84
NECTIN3Q9NQS3 YBX1P1-201ENST00000445822 960 ntBASIC20.27■□□□□ 0.84
NECTIN3Q9NQS3 AC087623.3-201ENST00000607047 1098 ntBASIC20.27■□□□□ 0.84
NECTIN3Q9NQS3 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
NECTIN3Q9NQS3 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NECTIN3Q9NQS3 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
NECTIN3Q9NQS3 BX005040.4-201ENST00000637145 1518 ntBASIC20.27■□□□□ 0.83
NECTIN3Q9NQS3 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
NECTIN3Q9NQS3 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NECTIN3Q9NQS3 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NECTIN3Q9NQS3 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NECTIN3Q9NQS3 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
NECTIN3Q9NQS3 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
NECTIN3Q9NQS3 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NECTIN3Q9NQS3 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NECTIN3Q9NQS3 FBXW4P1-201ENST00000426721 2239 ntBASIC20.26■□□□□ 0.83
NECTIN3Q9NQS3 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NECTIN3Q9NQS3 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NECTIN3Q9NQS3 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NECTIN3Q9NQS3 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NECTIN3Q9NQS3 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
NECTIN3Q9NQS3 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
NECTIN3Q9NQS3 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NECTIN3Q9NQS3 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
NECTIN3Q9NQS3 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
NECTIN3Q9NQS3 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.26■□□□□ 0.83
NECTIN3Q9NQS3 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms