Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PKP4Q99569 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PKP4Q99569 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.71■□□□□ 0.91
PKP4Q99569 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PKP4Q99569 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PKP4Q99569 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PKP4Q99569 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.71■□□□□ 0.91
PKP4Q99569 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PKP4Q99569 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.71■□□□□ 0.91
PKP4Q99569 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.71■□□□□ 0.91
PKP4Q99569 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.71■□□□□ 0.91
PKP4Q99569 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.71■□□□□ 0.91
PKP4Q99569 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.71■□□□□ 0.91
PKP4Q99569 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
PKP4Q99569 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
PKP4Q99569 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.7■□□□□ 0.91
PKP4Q99569 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PKP4Q99569 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.7■□□□□ 0.9
PKP4Q99569 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.7■□□□□ 0.9
PKP4Q99569 YBX1P1-201ENST00000445822 960 ntBASIC20.7■□□□□ 0.9
PKP4Q99569 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
PKP4Q99569 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PKP4Q99569 AC104564.3-201ENST00000582367 638 ntBASIC20.7■□□□□ 0.9
PKP4Q99569 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
PKP4Q99569 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.7■□□□□ 0.9
PKP4Q99569 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.7■□□□□ 0.9
PKP4Q99569 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PKP4Q99569 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PKP4Q99569 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PKP4Q99569 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
PKP4Q99569 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PKP4Q99569 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
PKP4Q99569 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.69■□□□□ 0.9
PKP4Q99569 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
PKP4Q99569 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PKP4Q99569 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PKP4Q99569 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
PKP4Q99569 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
PKP4Q99569 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.69■□□□□ 0.9
PKP4Q99569 AC123595.1-201ENST00000440769 1046 ntBASIC20.69■□□□□ 0.9
PKP4Q99569 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PKP4Q99569 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.69■□□□□ 0.9
PKP4Q99569 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PKP4Q99569 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PKP4Q99569 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PKP4Q99569 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PKP4Q99569 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PKP4Q99569 LINC02228-203ENST00000641970 1355 ntBASIC20.69■□□□□ 0.9
PKP4Q99569 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PKP4Q99569 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PKP4Q99569 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PKP4Q99569 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PKP4Q99569 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PKP4Q99569 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PKP4Q99569 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
PKP4Q99569 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PKP4Q99569 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.68■□□□□ 0.9
PKP4Q99569 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PKP4Q99569 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.68■□□□□ 0.9
PKP4Q99569 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.68■□□□□ 0.9
PKP4Q99569 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.68■□□□□ 0.9
PKP4Q99569 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
PKP4Q99569 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.68■□□□□ 0.9
PKP4Q99569 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
PKP4Q99569 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.68■□□□□ 0.9
PKP4Q99569 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PKP4Q99569 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
PKP4Q99569 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
PKP4Q99569 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PKP4Q99569 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.68■□□□□ 0.9
PKP4Q99569 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PKP4Q99569 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PKP4Q99569 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.67■□□□□ 0.9
PKP4Q99569 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.67■□□□□ 0.9
PKP4Q99569 AC244015.2-201ENST00000616358 1861 ntBASIC20.67■□□□□ 0.9
PKP4Q99569 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.67■□□□□ 0.9
PKP4Q99569 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PKP4Q99569 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
PKP4Q99569 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PKP4Q99569 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PKP4Q99569 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.67■□□□□ 0.9
PKP4Q99569 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.67■□□□□ 0.9
PKP4Q99569 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.67■□□□□ 0.9
PKP4Q99569 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
PKP4Q99569 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.67■□□□□ 0.9
PKP4Q99569 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.67■□□□□ 0.9
PKP4Q99569 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
PKP4Q99569 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.67■□□□□ 0.9
PKP4Q99569 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PKP4Q99569 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PKP4Q99569 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
PKP4Q99569 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PKP4Q99569 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PKP4Q99569 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.66■□□□□ 0.9
PKP4Q99569 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.66■□□□□ 0.9
PKP4Q99569 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.66■□□□□ 0.9
PKP4Q99569 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.66■□□□□ 0.9
PKP4Q99569 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.66■□□□□ 0.9
PKP4Q99569 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.66■□□□□ 0.9
PKP4Q99569 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms