Protein–RNA interactions for Protein: Q96QR1

SCGB3A1, Secretoglobin family 3A member 1, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCGB3A1Q96QR1 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCGB3A1Q96QR1 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC15.17■□□□□ 0.02
SCGB3A1Q96QR1 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCGB3A1Q96QR1 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SCGB3A1Q96QR1 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCGB3A1Q96QR1 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
SCGB3A1Q96QR1 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCGB3A1Q96QR1 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
SCGB3A1Q96QR1 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC15.17■□□□□ 0.02
SCGB3A1Q96QR1 GPX1-201ENST00000419349 1106 ntBASIC15.17■□□□□ 0.02
SCGB3A1Q96QR1 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC15.17■□□□□ 0.02
SCGB3A1Q96QR1 AC104564.3-201ENST00000582367 638 ntBASIC15.17■□□□□ 0.02
SCGB3A1Q96QR1 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC15.17■□□□□ 0.02
SCGB3A1Q96QR1 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCGB3A1Q96QR1 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCGB3A1Q96QR1 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SCGB3A1Q96QR1 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC15.17■□□□□ 0.02
SCGB3A1Q96QR1 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCGB3A1Q96QR1 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SCGB3A1Q96QR1 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SCGB3A1Q96QR1 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCGB3A1Q96QR1 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SCGB3A1Q96QR1 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SCGB3A1Q96QR1 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC15.16■□□□□ 0.02
SCGB3A1Q96QR1 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SCGB3A1Q96QR1 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SCGB3A1Q96QR1 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
SCGB3A1Q96QR1 REST-206ENST00000612429 1376 ntTSL 5 BASIC15.16■□□□□ 0.02
SCGB3A1Q96QR1 REST-207ENST00000616975 1370 ntTSL 5 BASIC15.16■□□□□ 0.02
SCGB3A1Q96QR1 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SCGB3A1Q96QR1 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SCGB3A1Q96QR1 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SCGB3A1Q96QR1 DUX4L9-201ENST00000449051 1259 ntBASIC15.16■□□□□ 0.02
SCGB3A1Q96QR1 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
SCGB3A1Q96QR1 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SCGB3A1Q96QR1 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC15.16■□□□□ 0.02
SCGB3A1Q96QR1 OXCT2P1-201ENST00000447263 1535 ntBASIC15.16■□□□□ 0.02
SCGB3A1Q96QR1 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC15.16■□□□□ 0.02
SCGB3A1Q96QR1 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SCGB3A1Q96QR1 AC090340.1-201ENST00000620778 4980 ntBASIC15.16■□□□□ 0.02
SCGB3A1Q96QR1 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC15.16■□□□□ 0.02
SCGB3A1Q96QR1 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SCGB3A1Q96QR1 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SCGB3A1Q96QR1 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC15.15■□□□□ 0.02
SCGB3A1Q96QR1 AF131216.4-201ENST00000638924 1588 ntBASIC15.15■□□□□ 0.02
SCGB3A1Q96QR1 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SCGB3A1Q96QR1 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SCGB3A1Q96QR1 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
SCGB3A1Q96QR1 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SCGB3A1Q96QR1 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SCGB3A1Q96QR1 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
SCGB3A1Q96QR1 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
SCGB3A1Q96QR1 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SCGB3A1Q96QR1 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SCGB3A1Q96QR1 MIR639-201ENST00000384974 98 ntBASIC15.15■□□□□ 0.02
SCGB3A1Q96QR1 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC15.15■□□□□ 0.02
SCGB3A1Q96QR1 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SCGB3A1Q96QR1 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SCGB3A1Q96QR1 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
SCGB3A1Q96QR1 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SCGB3A1Q96QR1 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
SCGB3A1Q96QR1 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
SCGB3A1Q96QR1 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
SCGB3A1Q96QR1 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
SCGB3A1Q96QR1 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC15.15■□□□□ 0.02
SCGB3A1Q96QR1 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SCGB3A1Q96QR1 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SCGB3A1Q96QR1 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SCGB3A1Q96QR1 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SCGB3A1Q96QR1 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SCGB3A1Q96QR1 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SCGB3A1Q96QR1 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SCGB3A1Q96QR1 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SCGB3A1Q96QR1 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC15.14■□□□□ 0.01
SCGB3A1Q96QR1 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SCGB3A1Q96QR1 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC15.14■□□□□ 0.01
SCGB3A1Q96QR1 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SCGB3A1Q96QR1 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SCGB3A1Q96QR1 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SCGB3A1Q96QR1 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SCGB3A1Q96QR1 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SCGB3A1Q96QR1 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SCGB3A1Q96QR1 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC15.14■□□□□ 0.01
SCGB3A1Q96QR1 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SCGB3A1Q96QR1 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SCGB3A1Q96QR1 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SCGB3A1Q96QR1 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SCGB3A1Q96QR1 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC15.14■□□□□ 0.01
SCGB3A1Q96QR1 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
SCGB3A1Q96QR1 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SCGB3A1Q96QR1 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC15.13■□□□□ 0.01
SCGB3A1Q96QR1 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
SCGB3A1Q96QR1 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
SCGB3A1Q96QR1 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
SCGB3A1Q96QR1 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC15.13■□□□□ 0.01
SCGB3A1Q96QR1 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SCGB3A1Q96QR1 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SCGB3A1Q96QR1 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SCGB3A1Q96QR1 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
SCGB3A1Q96QR1 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms