Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RPGRQ92834 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
RPGRQ92834 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC26.38■■□□□ 1.81
RPGRQ92834 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
RPGRQ92834 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RPGRQ92834 PRORSD1P-201ENST00000295112 541 ntBASIC26.38■■□□□ 1.81
RPGRQ92834 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RPGRQ92834 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RPGRQ92834 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
RPGRQ92834 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
RPGRQ92834 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC26.38■■□□□ 1.81
RPGRQ92834 RARRES2P4-201ENST00000514074 484 ntBASIC26.38■■□□□ 1.81
RPGRQ92834 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC26.38■■□□□ 1.81
RPGRQ92834 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC26.38■■□□□ 1.81
RPGRQ92834 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
RPGRQ92834 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC26.38■■□□□ 1.81
RPGRQ92834 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC26.38■■□□□ 1.81
RPGRQ92834 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
RPGRQ92834 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
RPGRQ92834 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
RPGRQ92834 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RPGRQ92834 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
RPGRQ92834 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
RPGRQ92834 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
RPGRQ92834 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC26.37■■□□□ 1.81
RPGRQ92834 AC083880.1-201ENST00000608266 535 ntBASIC26.37■■□□□ 1.81
RPGRQ92834 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RPGRQ92834 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RPGRQ92834 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RPGRQ92834 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RPGRQ92834 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC26.36■■□□□ 1.81
RPGRQ92834 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
RPGRQ92834 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
RPGRQ92834 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
RPGRQ92834 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RPGRQ92834 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC26.36■■□□□ 1.81
RPGRQ92834 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC26.36■■□□□ 1.81
RPGRQ92834 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC26.36■■□□□ 1.81
RPGRQ92834 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC26.36■■□□□ 1.81
RPGRQ92834 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC26.36■■□□□ 1.81
RPGRQ92834 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC26.36■■□□□ 1.81
RPGRQ92834 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC26.36■■□□□ 1.81
RPGRQ92834 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RPGRQ92834 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
RPGRQ92834 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RPGRQ92834 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
RPGRQ92834 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RPGRQ92834 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
RPGRQ92834 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RPGRQ92834 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
RPGRQ92834 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
RPGRQ92834 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
RPGRQ92834 AC097658.1-201ENST00000475555 843 ntBASIC26.35■■□□□ 1.81
RPGRQ92834 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC26.35■■□□□ 1.81
RPGRQ92834 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC26.35■■□□□ 1.81
RPGRQ92834 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
RPGRQ92834 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC26.35■■□□□ 1.81
RPGRQ92834 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC26.35■■□□□ 1.81
RPGRQ92834 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
RPGRQ92834 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
RPGRQ92834 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
RPGRQ92834 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC26.34■■□□□ 1.81
RPGRQ92834 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC26.34■■□□□ 1.81
RPGRQ92834 AC137767.1-201ENST00000602918 1920 ntBASIC26.34■■□□□ 1.81
RPGRQ92834 RHEB-204ENST00000472642 900 ntTSL 3 BASIC26.34■■□□□ 1.81
RPGRQ92834 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC26.34■■□□□ 1.81
RPGRQ92834 ISCU-212ENST00000547005 795 ntTSL 3 BASIC26.34■■□□□ 1.81
RPGRQ92834 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
RPGRQ92834 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
RPGRQ92834 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC26.33■■□□□ 1.81
RPGRQ92834 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC26.33■■□□□ 1.81
RPGRQ92834 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC26.33■■□□□ 1.81
RPGRQ92834 AL591742.1-201ENST00000604433 565 ntBASIC26.33■■□□□ 1.81
RPGRQ92834 FGF8-207ENST00000618991 856 ntTSL 3 BASIC26.33■■□□□ 1.81
RPGRQ92834 MYC-209ENST00000641252 345 ntBASIC26.33■■□□□ 1.81
RPGRQ92834 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
RPGRQ92834 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC26.33■■□□□ 1.81
RPGRQ92834 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
RPGRQ92834 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RPGRQ92834 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RPGRQ92834 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
RPGRQ92834 KRT16P2-201ENST00000414673 1423 ntBASIC26.32■■□□□ 1.8
RPGRQ92834 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
RPGRQ92834 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC26.32■■□□□ 1.8
RPGRQ92834 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC26.32■■□□□ 1.8
RPGRQ92834 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
RPGRQ92834 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
RPGRQ92834 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RPGRQ92834 RBM17P2-201ENST00000616397 1405 ntBASIC26.31■■□□□ 1.8
RPGRQ92834 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC26.31■■□□□ 1.8
RPGRQ92834 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
RPGRQ92834 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC26.31■■□□□ 1.8
RPGRQ92834 BET1L-207ENST00000529614 560 ntTSL 5 BASIC26.31■■□□□ 1.8
RPGRQ92834 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC26.31■■□□□ 1.8
RPGRQ92834 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC26.31■■□□□ 1.8
RPGRQ92834 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
RPGRQ92834 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
RPGRQ92834 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
RPGRQ92834 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RPGRQ92834 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms