Protein–RNA interactions for Protein: Q5XF90

Atp13a4, Probable cation-transporting ATPase 13A4, mousemouse

Predictions only

Length 1,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp13a4Q5XF90 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Atp13a4Q5XF90 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.32■□□□□ 0.84
Atp13a4Q5XF90 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
Atp13a4Q5XF90 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Atp13a4Q5XF90 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Atp13a4Q5XF90 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Atp13a4Q5XF90 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
Atp13a4Q5XF90 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Atp13a4Q5XF90 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Atp13a4Q5XF90 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.31■□□□□ 0.84
Atp13a4Q5XF90 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Atp13a4Q5XF90 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Atp13a4Q5XF90 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.31■□□□□ 0.84
Atp13a4Q5XF90 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Atp13a4Q5XF90 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
Atp13a4Q5XF90 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
Atp13a4Q5XF90 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Atp13a4Q5XF90 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
Atp13a4Q5XF90 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Atp13a4Q5XF90 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Atp13a4Q5XF90 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Atp13a4Q5XF90 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Atp13a4Q5XF90 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Atp13a4Q5XF90 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Atp13a4Q5XF90 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Atp13a4Q5XF90 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Atp13a4Q5XF90 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Atp13a4Q5XF90 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Atp13a4Q5XF90 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.3■□□□□ 0.84
Atp13a4Q5XF90 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.3■□□□□ 0.84
Atp13a4Q5XF90 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.3■□□□□ 0.84
Atp13a4Q5XF90 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Atp13a4Q5XF90 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Atp13a4Q5XF90 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Atp13a4Q5XF90 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Atp13a4Q5XF90 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Atp13a4Q5XF90 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Atp13a4Q5XF90 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Atp13a4Q5XF90 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.29■□□□□ 0.84
Atp13a4Q5XF90 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Atp13a4Q5XF90 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Atp13a4Q5XF90 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.29■□□□□ 0.84
Atp13a4Q5XF90 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Atp13a4Q5XF90 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.29■□□□□ 0.84
Atp13a4Q5XF90 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Atp13a4Q5XF90 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Atp13a4Q5XF90 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Atp13a4Q5XF90 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
Atp13a4Q5XF90 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.29■□□□□ 0.84
Atp13a4Q5XF90 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Atp13a4Q5XF90 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Atp13a4Q5XF90 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Atp13a4Q5XF90 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Atp13a4Q5XF90 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.28■□□□□ 0.84
Atp13a4Q5XF90 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Atp13a4Q5XF90 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Atp13a4Q5XF90 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Atp13a4Q5XF90 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Atp13a4Q5XF90 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Atp13a4Q5XF90 Gm8495-201ENSMUST00000188740 694 ntBASIC20.28■□□□□ 0.84
Atp13a4Q5XF90 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Atp13a4Q5XF90 Gm18671-201ENSMUST00000214826 683 ntBASIC20.28■□□□□ 0.84
Atp13a4Q5XF90 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Atp13a4Q5XF90 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Atp13a4Q5XF90 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Atp13a4Q5XF90 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Atp13a4Q5XF90 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Atp13a4Q5XF90 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Atp13a4Q5XF90 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.27■□□□□ 0.84
Atp13a4Q5XF90 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Atp13a4Q5XF90 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Atp13a4Q5XF90 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Atp13a4Q5XF90 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Atp13a4Q5XF90 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Atp13a4Q5XF90 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Atp13a4Q5XF90 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Atp13a4Q5XF90 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Atp13a4Q5XF90 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Atp13a4Q5XF90 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Atp13a4Q5XF90 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Atp13a4Q5XF90 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Atp13a4Q5XF90 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Atp13a4Q5XF90 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Atp13a4Q5XF90 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.26■□□□□ 0.83
Atp13a4Q5XF90 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Atp13a4Q5XF90 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Atp13a4Q5XF90 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Atp13a4Q5XF90 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Atp13a4Q5XF90 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Atp13a4Q5XF90 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Atp13a4Q5XF90 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Atp13a4Q5XF90 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Atp13a4Q5XF90 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.25■□□□□ 0.83
Atp13a4Q5XF90 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Atp13a4Q5XF90 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Atp13a4Q5XF90 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Atp13a4Q5XF90 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.25■□□□□ 0.83
Atp13a4Q5XF90 AV356131-201ENSMUST00000206201 750 ntBASIC20.25■□□□□ 0.83
Atp13a4Q5XF90 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Atp13a4Q5XF90 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms