Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC25■■□□□ 1.59
SHROOM1Q2M3G4 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC25■■□□□ 1.59
SHROOM1Q2M3G4 KRT18P20-201ENST00000548986 1279 ntBASIC25■■□□□ 1.59
SHROOM1Q2M3G4 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC25■■□□□ 1.59
SHROOM1Q2M3G4 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SHROOM1Q2M3G4 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC25■■□□□ 1.59
SHROOM1Q2M3G4 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC25■■□□□ 1.59
SHROOM1Q2M3G4 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
SHROOM1Q2M3G4 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SHROOM1Q2M3G4 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
SHROOM1Q2M3G4 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SHROOM1Q2M3G4 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SHROOM1Q2M3G4 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC24.99■■□□□ 1.59
SHROOM1Q2M3G4 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC24.99■■□□□ 1.59
SHROOM1Q2M3G4 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC24.99■■□□□ 1.59
SHROOM1Q2M3G4 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SHROOM1Q2M3G4 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
SHROOM1Q2M3G4 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
SHROOM1Q2M3G4 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC24.99■■□□□ 1.59
SHROOM1Q2M3G4 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC24.99■■□□□ 1.59
SHROOM1Q2M3G4 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SHROOM1Q2M3G4 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SHROOM1Q2M3G4 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
SHROOM1Q2M3G4 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC24.98■■□□□ 1.59
SHROOM1Q2M3G4 AC068338.2-201ENST00000563278 1430 ntBASIC24.98■■□□□ 1.59
SHROOM1Q2M3G4 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
SHROOM1Q2M3G4 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SHROOM1Q2M3G4 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
SHROOM1Q2M3G4 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC24.98■■□□□ 1.59
SHROOM1Q2M3G4 AC105036.2-201ENST00000569468 176 ntBASIC24.98■■□□□ 1.59
SHROOM1Q2M3G4 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SHROOM1Q2M3G4 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SHROOM1Q2M3G4 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
SHROOM1Q2M3G4 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
SHROOM1Q2M3G4 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC24.97■■□□□ 1.59
SHROOM1Q2M3G4 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC24.97■■□□□ 1.59
SHROOM1Q2M3G4 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SHROOM1Q2M3G4 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
SHROOM1Q2M3G4 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
SHROOM1Q2M3G4 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC24.97■■□□□ 1.59
SHROOM1Q2M3G4 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SHROOM1Q2M3G4 TERF1P5-201ENST00000477545 1207 ntBASIC24.97■■□□□ 1.59
SHROOM1Q2M3G4 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SHROOM1Q2M3G4 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
SHROOM1Q2M3G4 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
SHROOM1Q2M3G4 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC24.97■■□□□ 1.59
SHROOM1Q2M3G4 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
SHROOM1Q2M3G4 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
SHROOM1Q2M3G4 CYP2T1P-201ENST00000432607 1285 ntBASIC24.96■■□□□ 1.59
SHROOM1Q2M3G4 MIR4651-201ENST00000582622 73 ntBASIC24.96■■□□□ 1.59
SHROOM1Q2M3G4 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
SHROOM1Q2M3G4 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
SHROOM1Q2M3G4 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
SHROOM1Q2M3G4 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC24.95■■□□□ 1.58
SHROOM1Q2M3G4 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC24.95■■□□□ 1.58
SHROOM1Q2M3G4 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.58
SHROOM1Q2M3G4 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC24.95■■□□□ 1.58
SHROOM1Q2M3G4 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
SHROOM1Q2M3G4 TSPY20P-201ENST00000450910 630 ntBASIC24.95■■□□□ 1.58
SHROOM1Q2M3G4 RNF146-206ENST00000480444 843 ntTSL 2 BASIC24.95■■□□□ 1.58
SHROOM1Q2M3G4 AF201337.1-201ENST00000520239 748 ntBASIC24.95■■□□□ 1.58
SHROOM1Q2M3G4 CD99P1-205ENST00000527459 561 ntBASIC24.95■■□□□ 1.58
SHROOM1Q2M3G4 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC24.95■■□□□ 1.58
SHROOM1Q2M3G4 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC24.95■■□□□ 1.58
SHROOM1Q2M3G4 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
SHROOM1Q2M3G4 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC24.95■■□□□ 1.58
SHROOM1Q2M3G4 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
SHROOM1Q2M3G4 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC24.94■■□□□ 1.58
SHROOM1Q2M3G4 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC24.94■■□□□ 1.58
SHROOM1Q2M3G4 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC24.94■■□□□ 1.58
SHROOM1Q2M3G4 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
SHROOM1Q2M3G4 AC069152.1-201ENST00000438030 544 ntBASIC24.94■■□□□ 1.58
SHROOM1Q2M3G4 AC093787.1-201ENST00000450396 207 ntBASIC24.94■■□□□ 1.58
SHROOM1Q2M3G4 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC24.94■■□□□ 1.58
SHROOM1Q2M3G4 AC003102.1-202ENST00000563394 1796 ntBASIC24.94■■□□□ 1.58
SHROOM1Q2M3G4 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
SHROOM1Q2M3G4 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
SHROOM1Q2M3G4 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
SHROOM1Q2M3G4 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
SHROOM1Q2M3G4 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
SHROOM1Q2M3G4 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC24.93■■□□□ 1.58
SHROOM1Q2M3G4 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
SHROOM1Q2M3G4 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC24.93■■□□□ 1.58
SHROOM1Q2M3G4 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC24.93■■□□□ 1.58
SHROOM1Q2M3G4 AC133552.2-202ENST00000575694 574 ntBASIC24.93■■□□□ 1.58
SHROOM1Q2M3G4 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
SHROOM1Q2M3G4 MARS-234ENST00000630571 216 ntTSL 5 BASIC24.93■■□□□ 1.58
SHROOM1Q2M3G4 MARS-235ENST00000630803 183 ntTSL 3 BASIC24.93■■□□□ 1.58
SHROOM1Q2M3G4 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC24.93■■□□□ 1.58
SHROOM1Q2M3G4 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
SHROOM1Q2M3G4 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC24.93■■□□□ 1.58
SHROOM1Q2M3G4 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC24.93■■□□□ 1.58
SHROOM1Q2M3G4 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC24.93■■□□□ 1.58
SHROOM1Q2M3G4 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
SHROOM1Q2M3G4 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
SHROOM1Q2M3G4 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
SHROOM1Q2M3G4 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC24.92■■□□□ 1.58
SHROOM1Q2M3G4 KRT18P6-201ENST00000555540 1265 ntBASIC24.92■■□□□ 1.58
SHROOM1Q2M3G4 SLC7A5P1-201ENST00000568957 537 ntBASIC24.92■■□□□ 1.58
SHROOM1Q2M3G4 AC013268.1-206ENST00000638368 961 ntBASIC24.92■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms