Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LMO1P25800 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LMO1P25800 RASA4CP-201ENST00000424092 1398 ntBASIC17.88■□□□□ 0.45
LMO1P25800 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LMO1P25800 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.88■□□□□ 0.45
LMO1P25800 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LMO1P25800 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LMO1P25800 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
LMO1P25800 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
LMO1P25800 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC17.87■□□□□ 0.45
LMO1P25800 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
LMO1P25800 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.87■□□□□ 0.45
LMO1P25800 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LMO1P25800 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LMO1P25800 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC17.87■□□□□ 0.45
LMO1P25800 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LMO1P25800 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LMO1P25800 LHPP-203ENST00000392757 840 ntTSL 3 BASIC17.87■□□□□ 0.45
LMO1P25800 MIR939-201ENST00000401314 82 ntBASIC17.87■□□□□ 0.45
LMO1P25800 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
LMO1P25800 AL031432.3-201ENST00000607698 485 ntBASIC17.87■□□□□ 0.45
LMO1P25800 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LMO1P25800 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.87■□□□□ 0.45
LMO1P25800 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LMO1P25800 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LMO1P25800 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
LMO1P25800 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
LMO1P25800 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LMO1P25800 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LMO1P25800 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17.86■□□□□ 0.45
LMO1P25800 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LMO1P25800 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LMO1P25800 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LMO1P25800 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LMO1P25800 GRAMD4P2-201ENST00000423297 1097 ntBASIC17.86■□□□□ 0.45
LMO1P25800 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC17.86■□□□□ 0.45
LMO1P25800 NALT1-201ENST00000429224 738 ntTSL 5 BASIC17.86■□□□□ 0.45
LMO1P25800 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC17.86■□□□□ 0.45
LMO1P25800 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LMO1P25800 AC091305.1-201ENST00000479476 895 ntBASIC17.86■□□□□ 0.45
LMO1P25800 AL136967.2-201ENST00000623968 743 ntBASIC17.86■□□□□ 0.45
LMO1P25800 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC17.86■□□□□ 0.45
LMO1P25800 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC17.86■□□□□ 0.45
LMO1P25800 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC17.86■□□□□ 0.45
LMO1P25800 AP006587.3-201ENST00000525742 1516 ntBASIC17.86■□□□□ 0.45
LMO1P25800 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
LMO1P25800 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LMO1P25800 AC003102.1-202ENST00000563394 1796 ntBASIC17.86■□□□□ 0.45
LMO1P25800 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LMO1P25800 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LMO1P25800 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
LMO1P25800 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.86■□□□□ 0.45
LMO1P25800 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
LMO1P25800 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LMO1P25800 MFF-203ENST00000349901 1716 ntTSL 2 BASIC17.85■□□□□ 0.45
LMO1P25800 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LMO1P25800 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
LMO1P25800 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
LMO1P25800 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
LMO1P25800 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC17.85■□□□□ 0.45
LMO1P25800 TSPY26P-201ENST00000476365 1326 ntBASIC17.85■□□□□ 0.45
LMO1P25800 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LMO1P25800 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC17.85■□□□□ 0.45
LMO1P25800 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.85■□□□□ 0.45
LMO1P25800 AL139246.5-201ENST00000606645 996 ntBASIC17.85■□□□□ 0.45
LMO1P25800 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.85■□□□□ 0.45
LMO1P25800 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
LMO1P25800 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LMO1P25800 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LMO1P25800 Z98882.1-201ENST00000622160 2253 ntBASIC17.84■□□□□ 0.45
LMO1P25800 ASL-203ENST00000380839 1765 ntTSL 5 BASIC17.84■□□□□ 0.45
LMO1P25800 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LMO1P25800 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LMO1P25800 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC17.84■□□□□ 0.45
LMO1P25800 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
LMO1P25800 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
LMO1P25800 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LMO1P25800 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
LMO1P25800 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC17.84■□□□□ 0.45
LMO1P25800 SUDS3P1-201ENST00000505831 966 ntBASIC17.84■□□□□ 0.45
LMO1P25800 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC17.84■□□□□ 0.45
LMO1P25800 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
LMO1P25800 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LMO1P25800 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LMO1P25800 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.84■□□□□ 0.45
LMO1P25800 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LMO1P25800 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.84■□□□□ 0.45
LMO1P25800 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LMO1P25800 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.84■□□□□ 0.45
LMO1P25800 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LMO1P25800 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
LMO1P25800 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
LMO1P25800 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.83■□□□□ 0.45
LMO1P25800 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LMO1P25800 AC009237.3-201ENST00000393279 1427 ntBASIC17.83■□□□□ 0.45
LMO1P25800 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
LMO1P25800 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LMO1P25800 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LMO1P25800 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LMO1P25800 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms