Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 pRNA.5-201ENST00000612139 90 ntBASIC20.43■□□□□ 0.86
CAPN3P20807 pRNA.11-201ENST00000618423 90 ntBASIC20.43■□□□□ 0.86
CAPN3P20807 pRNA.13-201ENST00000619112 90 ntBASIC20.43■□□□□ 0.86
CAPN3P20807 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.43■□□□□ 0.86
CAPN3P20807 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CAPN3P20807 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CAPN3P20807 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
CAPN3P20807 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CAPN3P20807 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
CAPN3P20807 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
CAPN3P20807 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.42■□□□□ 0.86
CAPN3P20807 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.42■□□□□ 0.86
CAPN3P20807 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CAPN3P20807 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CAPN3P20807 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CAPN3P20807 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CAPN3P20807 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.42■□□□□ 0.86
CAPN3P20807 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CAPN3P20807 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CAPN3P20807 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CAPN3P20807 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.42■□□□□ 0.86
CAPN3P20807 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CAPN3P20807 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.42■□□□□ 0.86
CAPN3P20807 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CAPN3P20807 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CAPN3P20807 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CAPN3P20807 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CAPN3P20807 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
CAPN3P20807 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.42■□□□□ 0.86
CAPN3P20807 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CAPN3P20807 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CAPN3P20807 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
CAPN3P20807 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CAPN3P20807 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CAPN3P20807 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CAPN3P20807 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CAPN3P20807 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.41■□□□□ 0.86
CAPN3P20807 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.41■□□□□ 0.86
CAPN3P20807 AL355001.2-201ENST00000620617 1191 ntBASIC20.41■□□□□ 0.86
CAPN3P20807 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CAPN3P20807 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CAPN3P20807 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.41■□□□□ 0.86
CAPN3P20807 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.41■□□□□ 0.86
CAPN3P20807 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CAPN3P20807 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.41■□□□□ 0.86
CAPN3P20807 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CAPN3P20807 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CAPN3P20807 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CAPN3P20807 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CAPN3P20807 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.41■□□□□ 0.86
CAPN3P20807 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CAPN3P20807 UNC93B3-201ENST00000308076 687 ntBASIC20.4■□□□□ 0.86
CAPN3P20807 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CAPN3P20807 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.4■□□□□ 0.86
CAPN3P20807 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.4■□□□□ 0.86
CAPN3P20807 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CAPN3P20807 LINC01521-201ENST00000504184 1943 ntBASIC20.4■□□□□ 0.86
CAPN3P20807 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CAPN3P20807 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.4■□□□□ 0.86
CAPN3P20807 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CAPN3P20807 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CAPN3P20807 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CAPN3P20807 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CAPN3P20807 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.39■□□□□ 0.86
CAPN3P20807 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.39■□□□□ 0.86
CAPN3P20807 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.86
CAPN3P20807 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.39■□□□□ 0.86
CAPN3P20807 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
CAPN3P20807 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
CAPN3P20807 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CAPN3P20807 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.39■□□□□ 0.85
CAPN3P20807 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.39■□□□□ 0.85
CAPN3P20807 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CAPN3P20807 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.39■□□□□ 0.85
CAPN3P20807 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.39■□□□□ 0.85
CAPN3P20807 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CAPN3P20807 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.39■□□□□ 0.85
CAPN3P20807 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.39■□□□□ 0.85
CAPN3P20807 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.39■□□□□ 0.85
CAPN3P20807 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CAPN3P20807 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CAPN3P20807 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CAPN3P20807 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CAPN3P20807 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CAPN3P20807 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
CAPN3P20807 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CAPN3P20807 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.38■□□□□ 0.85
CAPN3P20807 AL031432.3-201ENST00000607698 485 ntBASIC20.38■□□□□ 0.85
CAPN3P20807 AL136162.1-201ENST00000607711 1078 ntBASIC20.38■□□□□ 0.85
CAPN3P20807 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CAPN3P20807 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.38■□□□□ 0.85
CAPN3P20807 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.38■□□□□ 0.85
CAPN3P20807 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CAPN3P20807 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CAPN3P20807 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CAPN3P20807 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.37■□□□□ 0.85
CAPN3P20807 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.37■□□□□ 0.85
CAPN3P20807 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CAPN3P20807 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CAPN3P20807 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms