Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
RARAP10276 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RARAP10276 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC22.33■■□□□ 1.17
RARAP10276 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC22.33■■□□□ 1.16
RARAP10276 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
RARAP10276 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
RARAP10276 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RARAP10276 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC22.32■■□□□ 1.16
RARAP10276 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
RARAP10276 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RARAP10276 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RARAP10276 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RARAP10276 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC22.31■■□□□ 1.16
RARAP10276 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RARAP10276 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
RARAP10276 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
RARAP10276 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
RARAP10276 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC22.31■■□□□ 1.16
RARAP10276 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
RARAP10276 MIR939-201ENST00000401314 82 ntBASIC22.31■■□□□ 1.16
RARAP10276 GRAMD4P2-201ENST00000423297 1097 ntBASIC22.31■■□□□ 1.16
RARAP10276 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC22.31■■□□□ 1.16
RARAP10276 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RARAP10276 AF213884.3-201ENST00000563833 479 ntBASIC22.31■■□□□ 1.16
RARAP10276 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC22.31■■□□□ 1.16
RARAP10276 AL139246.5-201ENST00000606645 996 ntBASIC22.31■■□□□ 1.16
RARAP10276 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RARAP10276 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RARAP10276 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC22.31■■□□□ 1.16
RARAP10276 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RARAP10276 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
RARAP10276 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC22.31■■□□□ 1.16
RARAP10276 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC22.31■■□□□ 1.16
RARAP10276 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC22.3■■□□□ 1.16
RARAP10276 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RARAP10276 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RARAP10276 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RARAP10276 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC22.3■■□□□ 1.16
RARAP10276 AICDA-202ENST00000537228 667 ntTSL 5 BASIC22.3■■□□□ 1.16
RARAP10276 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
RARAP10276 AL136967.2-201ENST00000623968 743 ntBASIC22.3■■□□□ 1.16
RARAP10276 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC22.3■■□□□ 1.16
RARAP10276 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RARAP10276 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RARAP10276 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
RARAP10276 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC22.3■■□□□ 1.16
RARAP10276 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC22.29■■□□□ 1.16
RARAP10276 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RARAP10276 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RARAP10276 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
RARAP10276 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RARAP10276 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RARAP10276 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RARAP10276 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC22.29■■□□□ 1.16
RARAP10276 AL034346.1-201ENST00000568244 1277 ntBASIC22.29■■□□□ 1.16
RARAP10276 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC22.29■■□□□ 1.16
RARAP10276 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
RARAP10276 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RARAP10276 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RARAP10276 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RARAP10276 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
RARAP10276 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RARAP10276 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RARAP10276 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RARAP10276 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RARAP10276 TSPY26P-201ENST00000476365 1326 ntBASIC22.29■■□□□ 1.16
RARAP10276 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RARAP10276 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RARAP10276 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC22.28■■□□□ 1.16
RARAP10276 RASA4CP-201ENST00000424092 1398 ntBASIC22.28■■□□□ 1.16
RARAP10276 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC22.28■■□□□ 1.16
RARAP10276 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
RARAP10276 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RARAP10276 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC22.28■■□□□ 1.16
RARAP10276 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RARAP10276 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RARAP10276 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RARAP10276 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RARAP10276 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC22.27■■□□□ 1.16
RARAP10276 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC22.27■■□□□ 1.16
RARAP10276 SUDS3P1-201ENST00000505831 966 ntBASIC22.27■■□□□ 1.16
RARAP10276 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC22.27■■□□□ 1.16
RARAP10276 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RARAP10276 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC22.27■■□□□ 1.16
RARAP10276 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RARAP10276 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC22.27■■□□□ 1.16
RARAP10276 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC22.27■■□□□ 1.15
RARAP10276 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RARAP10276 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RARAP10276 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
RARAP10276 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC22.26■■□□□ 1.15
RARAP10276 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
RARAP10276 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
RARAP10276 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RARAP10276 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RARAP10276 AC091305.1-201ENST00000479476 895 ntBASIC22.26■■□□□ 1.15
RARAP10276 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RARAP10276 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC22.26■■□□□ 1.15
RARAP10276 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC22.26■■□□□ 1.15
RARAP10276 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms