Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.38■□□□□ 0.69
FREM3P0C091 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
FREM3P0C091 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FREM3P0C091 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FREM3P0C091 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
FREM3P0C091 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
FREM3P0C091 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FREM3P0C091 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FREM3P0C091 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FREM3P0C091 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.37■□□□□ 0.69
FREM3P0C091 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.37■□□□□ 0.69
FREM3P0C091 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.37■□□□□ 0.69
FREM3P0C091 AL137784.2-201ENST00000607332 1000 ntBASIC19.37■□□□□ 0.69
FREM3P0C091 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FREM3P0C091 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FREM3P0C091 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
FREM3P0C091 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FREM3P0C091 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
FREM3P0C091 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
FREM3P0C091 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FREM3P0C091 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
FREM3P0C091 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.37■□□□□ 0.69
FREM3P0C091 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FREM3P0C091 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FREM3P0C091 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FREM3P0C091 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
FREM3P0C091 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.36■□□□□ 0.69
FREM3P0C091 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
FREM3P0C091 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.36■□□□□ 0.69
FREM3P0C091 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.36■□□□□ 0.69
FREM3P0C091 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
FREM3P0C091 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.36■□□□□ 0.69
FREM3P0C091 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
FREM3P0C091 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
FREM3P0C091 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
FREM3P0C091 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
FREM3P0C091 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
FREM3P0C091 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.36■□□□□ 0.69
FREM3P0C091 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
FREM3P0C091 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
FREM3P0C091 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
FREM3P0C091 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.36■□□□□ 0.69
FREM3P0C091 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
FREM3P0C091 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.35■□□□□ 0.69
FREM3P0C091 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.35■□□□□ 0.69
FREM3P0C091 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
FREM3P0C091 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
FREM3P0C091 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
FREM3P0C091 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
FREM3P0C091 AC026471.6-201ENST00000622954 1905 ntBASIC19.35■□□□□ 0.69
FREM3P0C091 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
FREM3P0C091 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FREM3P0C091 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.34■□□□□ 0.69
FREM3P0C091 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.34■□□□□ 0.69
FREM3P0C091 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
FREM3P0C091 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
FREM3P0C091 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
FREM3P0C091 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.34■□□□□ 0.69
FREM3P0C091 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
FREM3P0C091 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FREM3P0C091 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.34■□□□□ 0.69
FREM3P0C091 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.34■□□□□ 0.69
FREM3P0C091 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.34■□□□□ 0.69
FREM3P0C091 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
FREM3P0C091 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
FREM3P0C091 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FREM3P0C091 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
FREM3P0C091 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
FREM3P0C091 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.33■□□□□ 0.69
FREM3P0C091 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
FREM3P0C091 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.33■□□□□ 0.69
FREM3P0C091 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
FREM3P0C091 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
FREM3P0C091 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
FREM3P0C091 CLDN5-201ENST00000403084 2357 ntBASIC19.33■□□□□ 0.68
FREM3P0C091 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
FREM3P0C091 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.68
FREM3P0C091 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
FREM3P0C091 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
FREM3P0C091 C11orf96-202ENST00000528572 1834 ntBASIC19.33■□□□□ 0.68
FREM3P0C091 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
FREM3P0C091 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
FREM3P0C091 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
FREM3P0C091 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.33■□□□□ 0.68
FREM3P0C091 CNN2P6-201ENST00000439038 900 ntBASIC19.33■□□□□ 0.68
FREM3P0C091 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.33■□□□□ 0.68
FREM3P0C091 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.33■□□□□ 0.68
FREM3P0C091 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.33■□□□□ 0.68
FREM3P0C091 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
FREM3P0C091 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
FREM3P0C091 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
FREM3P0C091 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
FREM3P0C091 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
FREM3P0C091 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FREM3P0C091 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
FREM3P0C091 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.32■□□□□ 0.68
FREM3P0C091 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FREM3P0C091 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FREM3P0C091 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
FREM3P0C091 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms