Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
CAPN1P07384 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CAPN1P07384 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CAPN1P07384 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.89■□□□□ 0.93
CAPN1P07384 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CAPN1P07384 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CAPN1P07384 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CAPN1P07384 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CAPN1P07384 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CAPN1P07384 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CAPN1P07384 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CAPN1P07384 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CAPN1P07384 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CAPN1P07384 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CAPN1P07384 YBX1P1-201ENST00000445822 960 ntBASIC20.88■□□□□ 0.93
CAPN1P07384 AL358852.1-201ENST00000623174 1268 ntBASIC20.88■□□□□ 0.93
CAPN1P07384 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CAPN1P07384 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CAPN1P07384 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.88■□□□□ 0.93
CAPN1P07384 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.88■□□□□ 0.93
CAPN1P07384 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.88■□□□□ 0.93
CAPN1P07384 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CAPN1P07384 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CAPN1P07384 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.88■□□□□ 0.93
CAPN1P07384 OR7E47P-201ENST00000546390 1422 ntBASIC20.87■□□□□ 0.93
CAPN1P07384 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CAPN1P07384 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
CAPN1P07384 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
CAPN1P07384 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CAPN1P07384 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CAPN1P07384 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CAPN1P07384 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.87■□□□□ 0.93
CAPN1P07384 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.87■□□□□ 0.93
CAPN1P07384 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.87■□□□□ 0.93
CAPN1P07384 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.87■□□□□ 0.93
CAPN1P07384 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CAPN1P07384 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.87■□□□□ 0.93
CAPN1P07384 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.87■□□□□ 0.93
CAPN1P07384 AC244015.2-201ENST00000616358 1861 ntBASIC20.87■□□□□ 0.93
CAPN1P07384 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CAPN1P07384 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CAPN1P07384 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CAPN1P07384 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.86■□□□□ 0.93
CAPN1P07384 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CAPN1P07384 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CAPN1P07384 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CAPN1P07384 AC027612.3-201ENST00000413684 1047 ntBASIC20.86■□□□□ 0.93
CAPN1P07384 AP005435.1-201ENST00000529293 1178 ntBASIC20.86■□□□□ 0.93
CAPN1P07384 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CAPN1P07384 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CAPN1P07384 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.86■□□□□ 0.93
CAPN1P07384 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CAPN1P07384 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CAPN1P07384 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CAPN1P07384 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CAPN1P07384 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
CAPN1P07384 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CAPN1P07384 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.85■□□□□ 0.93
CAPN1P07384 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.85■□□□□ 0.93
CAPN1P07384 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.85■□□□□ 0.93
CAPN1P07384 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
CAPN1P07384 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.85■□□□□ 0.93
CAPN1P07384 AC012414.1-201ENST00000556676 535 ntBASIC20.85■□□□□ 0.93
CAPN1P07384 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CAPN1P07384 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CAPN1P07384 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CAPN1P07384 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
CAPN1P07384 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CAPN1P07384 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CAPN1P07384 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CAPN1P07384 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CAPN1P07384 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CAPN1P07384 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CAPN1P07384 AC034268.1-201ENST00000441047 882 ntBASIC20.84■□□□□ 0.93
CAPN1P07384 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.84■□□□□ 0.93
CAPN1P07384 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CAPN1P07384 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.84■□□□□ 0.93
CAPN1P07384 MIR6084-201ENST00000622012 110 ntBASIC20.84■□□□□ 0.93
CAPN1P07384 AC087239.1-201ENST00000622671 572 ntBASIC20.84■□□□□ 0.93
CAPN1P07384 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CAPN1P07384 AC026471.6-201ENST00000622954 1905 ntBASIC20.84■□□□□ 0.93
CAPN1P07384 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
CAPN1P07384 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.84■□□□□ 0.93
CAPN1P07384 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CAPN1P07384 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CAPN1P07384 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
CAPN1P07384 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CAPN1P07384 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.83■□□□□ 0.93
CAPN1P07384 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CAPN1P07384 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CAPN1P07384 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
CAPN1P07384 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CAPN1P07384 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CAPN1P07384 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.83■□□□□ 0.93
CAPN1P07384 AC123595.1-201ENST00000440769 1046 ntBASIC20.83■□□□□ 0.93
CAPN1P07384 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.83■□□□□ 0.93
CAPN1P07384 AC010141.3-201ENST00000456659 717 ntBASIC20.83■□□□□ 0.93
CAPN1P07384 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.83■□□□□ 0.93
CAPN1P07384 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.83■□□□□ 0.93
CAPN1P07384 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms