Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atf6F6VAN0 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atf6F6VAN0 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atf6F6VAN0 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Atf6F6VAN0 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Atf6F6VAN0 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atf6F6VAN0 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atf6F6VAN0 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atf6F6VAN0 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atf6F6VAN0 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.25■□□□□ 0.67
Atf6F6VAN0 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.25■□□□□ 0.67
Atf6F6VAN0 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atf6F6VAN0 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atf6F6VAN0 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Atf6F6VAN0 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atf6F6VAN0 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Atf6F6VAN0 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atf6F6VAN0 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atf6F6VAN0 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
Atf6F6VAN0 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Atf6F6VAN0 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atf6F6VAN0 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atf6F6VAN0 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.24■□□□□ 0.67
Atf6F6VAN0 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.24■□□□□ 0.67
Atf6F6VAN0 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atf6F6VAN0 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atf6F6VAN0 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atf6F6VAN0 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atf6F6VAN0 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atf6F6VAN0 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atf6F6VAN0 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Atf6F6VAN0 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atf6F6VAN0 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atf6F6VAN0 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Atf6F6VAN0 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atf6F6VAN0 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Atf6F6VAN0 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atf6F6VAN0 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.23■□□□□ 0.67
Atf6F6VAN0 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atf6F6VAN0 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Atf6F6VAN0 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atf6F6VAN0 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atf6F6VAN0 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atf6F6VAN0 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Atf6F6VAN0 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.23■□□□□ 0.67
Atf6F6VAN0 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atf6F6VAN0 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Atf6F6VAN0 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atf6F6VAN0 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atf6F6VAN0 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atf6F6VAN0 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atf6F6VAN0 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.22■□□□□ 0.67
Atf6F6VAN0 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.22■□□□□ 0.67
Atf6F6VAN0 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Atf6F6VAN0 Reep4-203ENSMUST00000226563 1444 ntBASIC19.22■□□□□ 0.67
Atf6F6VAN0 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atf6F6VAN0 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.22■□□□□ 0.67
Atf6F6VAN0 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Atf6F6VAN0 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atf6F6VAN0 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atf6F6VAN0 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atf6F6VAN0 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atf6F6VAN0 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atf6F6VAN0 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.21■□□□□ 0.67
Atf6F6VAN0 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atf6F6VAN0 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atf6F6VAN0 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atf6F6VAN0 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atf6F6VAN0 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atf6F6VAN0 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.2■□□□□ 0.66
Atf6F6VAN0 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Atf6F6VAN0 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atf6F6VAN0 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.2■□□□□ 0.66
Atf6F6VAN0 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Atf6F6VAN0 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atf6F6VAN0 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atf6F6VAN0 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Atf6F6VAN0 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atf6F6VAN0 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atf6F6VAN0 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.2■□□□□ 0.66
Atf6F6VAN0 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atf6F6VAN0 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atf6F6VAN0 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Atf6F6VAN0 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.2■□□□□ 0.66
Atf6F6VAN0 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Atf6F6VAN0 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atf6F6VAN0 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atf6F6VAN0 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atf6F6VAN0 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atf6F6VAN0 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atf6F6VAN0 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Atf6F6VAN0 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.19■□□□□ 0.66
Atf6F6VAN0 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atf6F6VAN0 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Atf6F6VAN0 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atf6F6VAN0 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.19■□□□□ 0.66
Atf6F6VAN0 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Atf6F6VAN0 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Atf6F6VAN0 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atf6F6VAN0 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms