Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC29.13■■■□□ 2.25
SBNO1A3KN83 AC142381.4-202ENST00000563973 229 ntBASIC29.13■■■□□ 2.25
SBNO1A3KN83 INO80E-214ENST00000620599 515 ntTSL 2 BASIC29.13■■■□□ 2.25
SBNO1A3KN83 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
SBNO1A3KN83 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
SBNO1A3KN83 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC29.13■■■□□ 2.25
SBNO1A3KN83 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
SBNO1A3KN83 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
SBNO1A3KN83 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC29.13■■■□□ 2.25
SBNO1A3KN83 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
SBNO1A3KN83 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
SBNO1A3KN83 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
SBNO1A3KN83 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC29.13■■■□□ 2.25
SBNO1A3KN83 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC29.13■■■□□ 2.25
SBNO1A3KN83 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
SBNO1A3KN83 OR7E47P-201ENST00000546390 1422 ntBASIC29.12■■■□□ 2.25
SBNO1A3KN83 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC29.12■■■□□ 2.25
SBNO1A3KN83 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC29.12■■■□□ 2.25
SBNO1A3KN83 RPS2P4-201ENST00000476944 856 ntBASIC29.12■■■□□ 2.25
SBNO1A3KN83 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC29.12■■■□□ 2.25
SBNO1A3KN83 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC29.11■■■□□ 2.25
SBNO1A3KN83 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
SBNO1A3KN83 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC29.11■■■□□ 2.25
SBNO1A3KN83 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
SBNO1A3KN83 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
SBNO1A3KN83 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
SBNO1A3KN83 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC29.11■■■□□ 2.25
SBNO1A3KN83 UNC93B5-201ENST00000530315 699 ntBASIC29.11■■■□□ 2.25
SBNO1A3KN83 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC29.11■■■□□ 2.25
SBNO1A3KN83 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC29.11■■■□□ 2.25
SBNO1A3KN83 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC29.11■■■□□ 2.25
SBNO1A3KN83 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
SBNO1A3KN83 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC29.11■■■□□ 2.25
SBNO1A3KN83 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
SBNO1A3KN83 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC29.1■■■□□ 2.25
SBNO1A3KN83 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
SBNO1A3KN83 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC29.1■■■□□ 2.25
SBNO1A3KN83 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC29.1■■■□□ 2.25
SBNO1A3KN83 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC29.1■■■□□ 2.25
SBNO1A3KN83 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC29.1■■■□□ 2.25
SBNO1A3KN83 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC29.1■■■□□ 2.25
SBNO1A3KN83 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC29.1■■■□□ 2.25
SBNO1A3KN83 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
SBNO1A3KN83 LINC00526-201ENST00000581067 1875 ntBASIC29.09■■■□□ 2.25
SBNO1A3KN83 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
SBNO1A3KN83 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC29.09■■■□□ 2.25
SBNO1A3KN83 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
SBNO1A3KN83 AC026366.1-201ENST00000488803 879 ntBASIC29.09■■■□□ 2.25
SBNO1A3KN83 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC29.09■■■□□ 2.25
SBNO1A3KN83 FGF8-207ENST00000618991 856 ntTSL 3 BASIC29.09■■■□□ 2.25
SBNO1A3KN83 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
SBNO1A3KN83 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
SBNO1A3KN83 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
SBNO1A3KN83 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
SBNO1A3KN83 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC29.08■■■□□ 2.25
SBNO1A3KN83 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
SBNO1A3KN83 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
SBNO1A3KN83 RBM17P2-201ENST00000616397 1405 ntBASIC29.08■■■□□ 2.25
SBNO1A3KN83 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
SBNO1A3KN83 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
SBNO1A3KN83 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC29.08■■■□□ 2.25
SBNO1A3KN83 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC29.08■■■□□ 2.25
SBNO1A3KN83 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC29.08■■■□□ 2.25
SBNO1A3KN83 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC29.08■■■□□ 2.25
SBNO1A3KN83 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC29.08■■■□□ 2.25
SBNO1A3KN83 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC29.08■■■□□ 2.25
SBNO1A3KN83 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC29.07■■■□□ 2.24
SBNO1A3KN83 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
SBNO1A3KN83 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
SBNO1A3KN83 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
SBNO1A3KN83 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC29.07■■■□□ 2.24
SBNO1A3KN83 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
SBNO1A3KN83 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC29.07■■■□□ 2.24
SBNO1A3KN83 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
SBNO1A3KN83 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC29.07■■■□□ 2.24
SBNO1A3KN83 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC29.06■■■□□ 2.24
SBNO1A3KN83 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
SBNO1A3KN83 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
SBNO1A3KN83 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC29.06■■■□□ 2.24
SBNO1A3KN83 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC29.06■■■□□ 2.24
SBNO1A3KN83 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
SBNO1A3KN83 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC29.06■■■□□ 2.24
SBNO1A3KN83 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC29.06■■■□□ 2.24
SBNO1A3KN83 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC29.06■■■□□ 2.24
SBNO1A3KN83 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC29.06■■■□□ 2.24
SBNO1A3KN83 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
SBNO1A3KN83 AC120498.10-201ENST00000621827 505 ntBASIC29.06■■■□□ 2.24
SBNO1A3KN83 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC29.06■■■□□ 2.24
SBNO1A3KN83 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC29.06■■■□□ 2.24
SBNO1A3KN83 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC29.05■■■□□ 2.24
SBNO1A3KN83 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC29.05■■■□□ 2.24
SBNO1A3KN83 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC29.05■■■□□ 2.24
SBNO1A3KN83 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
SBNO1A3KN83 UNC93B4-201ENST00000505679 747 ntBASIC29.05■■■□□ 2.24
SBNO1A3KN83 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC29.05■■■□□ 2.24
SBNO1A3KN83 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC29.05■■■□□ 2.24
SBNO1A3KN83 AC008175.2-201ENST00000612840 297 ntBASIC29.05■■■□□ 2.24
SBNO1A3KN83 AC073648.6-201ENST00000641589 218 ntBASIC29.05■■■□□ 2.24
SBNO1A3KN83 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC29.05■■■□□ 2.24
SBNO1A3KN83 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC29.04■■■□□ 2.24
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms