Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
FNDC3AQ9Y2H6 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
FNDC3AQ9Y2H6 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
FNDC3AQ9Y2H6 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
FNDC3AQ9Y2H6 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.74■■□□□ 1.07
FNDC3AQ9Y2H6 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
FNDC3AQ9Y2H6 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
FNDC3AQ9Y2H6 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.74■■□□□ 1.07
FNDC3AQ9Y2H6 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.74■■□□□ 1.07
FNDC3AQ9Y2H6 AC137761.2-201ENST00000561729 223 ntBASIC21.74■■□□□ 1.07
FNDC3AQ9Y2H6 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.74■■□□□ 1.07
FNDC3AQ9Y2H6 AC145350.3-201ENST00000569033 163 ntBASIC21.74■■□□□ 1.07
FNDC3AQ9Y2H6 RAP2CP1-201ENST00000605103 478 ntBASIC21.74■■□□□ 1.07
FNDC3AQ9Y2H6 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
FNDC3AQ9Y2H6 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.74■■□□□ 1.07
FNDC3AQ9Y2H6 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.74■■□□□ 1.07
FNDC3AQ9Y2H6 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
FNDC3AQ9Y2H6 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
FNDC3AQ9Y2H6 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
FNDC3AQ9Y2H6 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
FNDC3AQ9Y2H6 AL117328.2-201ENST00000624617 1940 ntBASIC21.73■■□□□ 1.07
FNDC3AQ9Y2H6 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
FNDC3AQ9Y2H6 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
FNDC3AQ9Y2H6 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
FNDC3AQ9Y2H6 AC016769.1-201ENST00000409132 1010 ntBASIC21.73■■□□□ 1.07
FNDC3AQ9Y2H6 AC010141.3-201ENST00000456659 717 ntBASIC21.73■■□□□ 1.07
FNDC3AQ9Y2H6 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.73■■□□□ 1.07
FNDC3AQ9Y2H6 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.73■■□□□ 1.07
FNDC3AQ9Y2H6 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.73■■□□□ 1.07
FNDC3AQ9Y2H6 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.73■■□□□ 1.07
FNDC3AQ9Y2H6 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.73■■□□□ 1.07
FNDC3AQ9Y2H6 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
FNDC3AQ9Y2H6 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
FNDC3AQ9Y2H6 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
FNDC3AQ9Y2H6 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
FNDC3AQ9Y2H6 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.72■■□□□ 1.07
FNDC3AQ9Y2H6 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
FNDC3AQ9Y2H6 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.72■■□□□ 1.07
FNDC3AQ9Y2H6 AC068587.7-201ENST00000641602 218 ntBASIC21.72■■□□□ 1.07
FNDC3AQ9Y2H6 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
FNDC3AQ9Y2H6 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
FNDC3AQ9Y2H6 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
FNDC3AQ9Y2H6 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.72■■□□□ 1.07
FNDC3AQ9Y2H6 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
FNDC3AQ9Y2H6 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
FNDC3AQ9Y2H6 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
FNDC3AQ9Y2H6 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
FNDC3AQ9Y2H6 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
FNDC3AQ9Y2H6 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
FNDC3AQ9Y2H6 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
FNDC3AQ9Y2H6 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.71■■□□□ 1.07
FNDC3AQ9Y2H6 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.71■■□□□ 1.07
FNDC3AQ9Y2H6 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
FNDC3AQ9Y2H6 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.71■■□□□ 1.07
FNDC3AQ9Y2H6 CDCA4P2-201ENST00000441182 718 ntBASIC21.71■■□□□ 1.07
FNDC3AQ9Y2H6 TPRG1LP1-201ENST00000598702 760 ntBASIC21.71■■□□□ 1.07
FNDC3AQ9Y2H6 AC073111.5-205ENST00000641717 521 ntBASIC21.71■■□□□ 1.07
FNDC3AQ9Y2H6 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
FNDC3AQ9Y2H6 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
FNDC3AQ9Y2H6 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
FNDC3AQ9Y2H6 AC127496.7-201ENST00000625110 1798 ntBASIC21.71■■□□□ 1.07
FNDC3AQ9Y2H6 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.71■■□□□ 1.07
FNDC3AQ9Y2H6 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
FNDC3AQ9Y2H6 AC139530.1-201ENST00000575312 1977 ntBASIC21.7■■□□□ 1.07
FNDC3AQ9Y2H6 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
FNDC3AQ9Y2H6 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
FNDC3AQ9Y2H6 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
FNDC3AQ9Y2H6 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
FNDC3AQ9Y2H6 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.7■■□□□ 1.06
FNDC3AQ9Y2H6 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.7■■□□□ 1.06
FNDC3AQ9Y2H6 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
FNDC3AQ9Y2H6 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.7■■□□□ 1.06
FNDC3AQ9Y2H6 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.7■■□□□ 1.06
FNDC3AQ9Y2H6 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.7■■□□□ 1.06
FNDC3AQ9Y2H6 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.7■■□□□ 1.06
FNDC3AQ9Y2H6 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
FNDC3AQ9Y2H6 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
FNDC3AQ9Y2H6 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
FNDC3AQ9Y2H6 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
FNDC3AQ9Y2H6 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
FNDC3AQ9Y2H6 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
FNDC3AQ9Y2H6 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
FNDC3AQ9Y2H6 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
FNDC3AQ9Y2H6 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
FNDC3AQ9Y2H6 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.69■■□□□ 1.06
FNDC3AQ9Y2H6 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
FNDC3AQ9Y2H6 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.69■■□□□ 1.06
FNDC3AQ9Y2H6 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.69■■□□□ 1.06
FNDC3AQ9Y2H6 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.69■■□□□ 1.06
FNDC3AQ9Y2H6 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.69■■□□□ 1.06
FNDC3AQ9Y2H6 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.69■■□□□ 1.06
FNDC3AQ9Y2H6 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
FNDC3AQ9Y2H6 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
FNDC3AQ9Y2H6 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
FNDC3AQ9Y2H6 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
FNDC3AQ9Y2H6 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.68■■□□□ 1.06
FNDC3AQ9Y2H6 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.68■■□□□ 1.06
FNDC3AQ9Y2H6 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
FNDC3AQ9Y2H6 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
FNDC3AQ9Y2H6 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms