Protein–RNA interactions for Protein: Q9JJI8

Rpl38, 60S ribosomal protein L38, mousemouse

Known RBP Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl38Q9JJI8 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rpl38Q9JJI8 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
Rpl38Q9JJI8 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rpl38Q9JJI8 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rpl38Q9JJI8 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rpl38Q9JJI8 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rpl38Q9JJI8 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rpl38Q9JJI8 Smad6-203ENSMUST00000179458 273 ntBASIC18.13■□□□□ 0.49
Rpl38Q9JJI8 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rpl38Q9JJI8 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rpl38Q9JJI8 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rpl38Q9JJI8 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rpl38Q9JJI8 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rpl38Q9JJI8 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rpl38Q9JJI8 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Rpl38Q9JJI8 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Rpl38Q9JJI8 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Rpl38Q9JJI8 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rpl38Q9JJI8 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.12■□□□□ 0.49
Rpl38Q9JJI8 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rpl38Q9JJI8 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rpl38Q9JJI8 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rpl38Q9JJI8 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rpl38Q9JJI8 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rpl38Q9JJI8 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rpl38Q9JJI8 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rpl38Q9JJI8 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rpl38Q9JJI8 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rpl38Q9JJI8 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rpl38Q9JJI8 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rpl38Q9JJI8 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rpl38Q9JJI8 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.12■□□□□ 0.49
Rpl38Q9JJI8 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Rpl38Q9JJI8 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.11■□□□□ 0.49
Rpl38Q9JJI8 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
Rpl38Q9JJI8 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rpl38Q9JJI8 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rpl38Q9JJI8 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rpl38Q9JJI8 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
Rpl38Q9JJI8 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Rpl38Q9JJI8 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rpl38Q9JJI8 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rpl38Q9JJI8 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rpl38Q9JJI8 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rpl38Q9JJI8 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rpl38Q9JJI8 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Rpl38Q9JJI8 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rpl38Q9JJI8 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rpl38Q9JJI8 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rpl38Q9JJI8 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Rpl38Q9JJI8 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rpl38Q9JJI8 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rpl38Q9JJI8 Gm8493-201ENSMUST00000196881 489 ntBASIC18.1■□□□□ 0.49
Rpl38Q9JJI8 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.1■□□□□ 0.49
Rpl38Q9JJI8 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Rpl38Q9JJI8 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rpl38Q9JJI8 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rpl38Q9JJI8 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rpl38Q9JJI8 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rpl38Q9JJI8 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rpl38Q9JJI8 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Rpl38Q9JJI8 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Rpl38Q9JJI8 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rpl38Q9JJI8 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rpl38Q9JJI8 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rpl38Q9JJI8 Gm43173-201ENSMUST00000202246 593 ntBASIC18.09■□□□□ 0.49
Rpl38Q9JJI8 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rpl38Q9JJI8 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Rpl38Q9JJI8 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Rpl38Q9JJI8 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rpl38Q9JJI8 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rpl38Q9JJI8 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rpl38Q9JJI8 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rpl38Q9JJI8 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rpl38Q9JJI8 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rpl38Q9JJI8 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rpl38Q9JJI8 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Rpl38Q9JJI8 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Rpl38Q9JJI8 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Rpl38Q9JJI8 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Rpl38Q9JJI8 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.08■□□□□ 0.49
Rpl38Q9JJI8 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rpl38Q9JJI8 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rpl38Q9JJI8 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Rpl38Q9JJI8 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rpl38Q9JJI8 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
Rpl38Q9JJI8 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.08■□□□□ 0.48
Rpl38Q9JJI8 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rpl38Q9JJI8 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rpl38Q9JJI8 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Rpl38Q9JJI8 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Rpl38Q9JJI8 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rpl38Q9JJI8 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rpl38Q9JJI8 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rpl38Q9JJI8 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rpl38Q9JJI8 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rpl38Q9JJI8 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rpl38Q9JJI8 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rpl38Q9JJI8 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rpl38Q9JJI8 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms