Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 ZFAND1-201ENST00000220669 1798 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.471e-6■■■■□ 22.8
CSTF2TQ9H0L4 ZFAND1-221ENST00000523096 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.471e-6■■■■□ 22.8
CSTF2TQ9H0L4 NDRG2-223ENST00000553867 848 ntTSL 512.04□□□□□ -0.481e-6■■■■□ 22.8
CSTF2TQ9H0L4 NDRG2-230ENST00000554398 565 ntTSL 412.04□□□□□ -0.481e-6■■■■□ 22.8
CSTF2TQ9H0L4 NDRG2-260ENST00000556974 1012 ntTSL 511.88□□□□□ -0.511e-6■■■■□ 22.8
CSTF2TQ9H0L4 NDRG2-256ENST00000556561 580 ntTSL 511.88□□□□□ -0.511e-6■■■■□ 22.8
CSTF2TQ9H0L4 RHOBTB3-214ENST00000513091 591 ntTSL 311.69□□□□□ -0.541e-6■■■■□ 22.8
CSTF2TQ9H0L4 ZFAND1-203ENST00000517450 550 ntTSL 411.38□□□□□ -0.591e-6■■■■□ 22.8
CSTF2TQ9H0L4 TBCD-224ENST00000576760 1059 ntTSL 511.36□□□□□ -0.591e-6■■■■□ 22.8
CSTF2TQ9H0L4 NDRG2-233ENST00000554472 587 ntTSL 411.26□□□□□ -0.611e-6■■■■□ 22.8
CSTF2TQ9H0L4 SNAP47-205ENST00000426344 2403 ntAPPRIS ALT2 TSL 211.16□□□□□ -0.621e-6■■■■□ 22.8
CSTF2TQ9H0L4 CEP120-207ENST00000510582 578 ntTSL 411.08□□□□□ -0.641e-6■■■■□ 22.8
CSTF2TQ9H0L4 NDRG2-214ENST00000553442 639 ntTSL 511.06□□□□□ -0.641e-6■■■■□ 22.8
CSTF2TQ9H0L4 ZFAND1-225ENST00000524339 811 ntTSL 211.01□□□□□ -0.651e-6■■■■□ 22.8
CSTF2TQ9H0L4 NDRG2-261ENST00000557113 558 ntTSL 410.92□□□□□ -0.661e-6■■■■□ 22.8
CSTF2TQ9H0L4 NDRG2-246ENST00000555695 823 ntTSL 510.91□□□□□ -0.661e-6■■■■□ 22.8
CSTF2TQ9H0L4 ZFAND1-209ENST00000519820 582 ntTSL 210.84□□□□□ -0.671e-6■■■■□ 22.8
CSTF2TQ9H0L4 SNAP47-204ENST00000418653 1867 ntAPPRIS ALT2 TSL 1 (best)10.81□□□□□ -0.681e-6■■■■□ 22.8
CSTF2TQ9H0L4 MTR-202ENST00000366577 10529 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.721e-6■■■■□ 22.8
CSTF2TQ9H0L4 USO1-204ENST00000514213 4034 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.741e-6■■■■□ 22.8
CSTF2TQ9H0L4 ZFAND1-223ENST00000523431 784 ntTSL 510.4□□□□□ -0.741e-6■■■■□ 22.8
CSTF2TQ9H0L4 ZFAND1-207ENST00000519464 1006 ntTSL 510.4□□□□□ -0.741e-6■■■■□ 22.8
CSTF2TQ9H0L4 ZFAND1-219ENST00000522520 1705 ntTSL 1 (best) BASIC10.38□□□□□ -0.751e-6■■■■□ 22.8
CSTF2TQ9H0L4 ZFAND1-222ENST00000523361 540 ntTSL 510.34□□□□□ -0.751e-6■■■■□ 22.8
CSTF2TQ9H0L4 NDRG2-210ENST00000397856 1309 ntTSL 5 BASIC10.28□□□□□ -0.761e-6■■■■□ 22.8
CSTF2TQ9H0L4 MTR-201ENST00000366576 5234 ntTSL 1 (best)10.27□□□□□ -0.761e-6■■■■□ 22.8
CSTF2TQ9H0L4 MTR-205ENST00000535889 10405 ntTSL 1 (best) BASIC10.27□□□□□ -0.771e-6■■■■□ 22.8
CSTF2TQ9H0L4 NDRG2-249ENST00000555869 871 ntTSL 510.11□□□□□ -0.791e-6■■■■□ 22.8
CSTF2TQ9H0L4 TBCD-211ENST00000572984 682 ntTSL 510.1□□□□□ -0.791e-6■■■■□ 22.8
CSTF2TQ9H0L4 NDRG2-248ENST00000555767 560 ntTSL 49.99□□□□□ -0.811e-6■■■■□ 22.8
CSTF2TQ9H0L4 NDRG2-219ENST00000553741 842 ntTSL 29.98□□□□□ -0.811e-6■■■■□ 22.8
CSTF2TQ9H0L4 NDRG2-216ENST00000553563 531 ntTSL 49.92□□□□□ -0.821e-6■■■■□ 22.8
CSTF2TQ9H0L4 ZFAND1-202ENST00000517353 841 ntTSL 39.92□□□□□ -0.821e-6■■■■□ 22.8
CSTF2TQ9H0L4 NDRG2-240ENST00000555026 1162 ntTSL 59.92□□□□□ -0.821e-6■■■■□ 22.8
CSTF2TQ9H0L4 USP54-201ENST00000339859 6247 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.831e-6■■■■□ 22.8
CSTF2TQ9H0L4 NDRG2-250ENST00000556008 1051 ntTSL 59.74□□□□□ -0.851e-6■■■■□ 22.8
CSTF2TQ9H0L4 SNAP47-211ENST00000491439 734 ntTSL 39.5□□□□□ -0.891e-6■■■■□ 22.8
CSTF2TQ9H0L4 ZNF432-205ENST00000598745 596 ntTSL 49.21□□□□□ -0.941e-6■■■■□ 22.8
CSTF2TQ9H0L4 ZFAND1-214ENST00000521287 772 ntTSL 3 BASIC9.2□□□□□ -0.941e-6■■■■□ 22.8
CSTF2TQ9H0L4 NDRG2-212ENST00000403829 1500 ntTSL 2 BASIC9.16□□□□□ -0.941e-6■■■■□ 22.8
CSTF2TQ9H0L4 NDRG2-267ENST00000557264 593 ntTSL 49.04□□□□□ -0.961e-6■■■■□ 22.8
CSTF2TQ9H0L4 ADCY7-205ENST00000563677 557 ntTSL 48.87□□□□□ -0.991e-6■■■■□ 22.8
CSTF2TQ9H0L4 POLA2-202ENST00000525924 873 ntTSL 58.87□□□□□ -0.991e-6■■■■□ 22.8
CSTF2TQ9H0L4 ZNF432-206ENST00000600368 764 ntTSL 58.84□□□□□ -0.991e-6■■■■□ 22.8
CSTF2TQ9H0L4 NDRG2-264ENST00000557169 851 ntTSL 28.77□□□□□ -1.011e-6■■■■□ 22.8
CSTF2TQ9H0L4 NDRG2-255ENST00000556457 635 ntTSL 58.7□□□□□ -1.021e-6■■■■□ 22.8
CSTF2TQ9H0L4 NDRG2-234ENST00000554483 561 ntTSL 48.57□□□□□ -1.041e-6■■■■□ 22.8
CSTF2TQ9H0L4 ZNF432-201ENST00000221315 2577 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.081e-6■■■■□ 22.8
CSTF2TQ9H0L4 NDRG2-275ENST00000557669 657 ntTSL 28.05□□□□□ -1.121e-6■■■■□ 22.8
CSTF2TQ9H0L4 NDRG2-224ENST00000553900 576 ntTSL 28.05□□□□□ -1.121e-6■■■■□ 22.8
CSTF2TQ9H0L4 NDRG2-263ENST00000557167 558 ntTSL 47.85□□□□□ -1.151e-6■■■■□ 22.8
CSTF2TQ9H0L4 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC7.65□□□□□ -1.181e-6■■■■□ 22.8
CSTF2TQ9H0L4 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC7.65□□□□□ -1.181e-6■■■■□ 22.8
CSTF2TQ9H0L4 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC7.14□□□□□ -1.271e-6■■■■□ 22.8
CSTF2TQ9H0L4 NDRG2-229ENST00000554379 553 ntTSL 47.12□□□□□ -1.271e-6■■■■□ 22.8
CSTF2TQ9H0L4 CEP120-206ENST00000508442 2645 ntTSL 26.98□□□□□ -1.291e-6■■■■□ 22.8
CSTF2TQ9H0L4 NDRG2-262ENST00000557149 583 ntTSL 26.33□□□□□ -1.41e-6■■■■□ 22.8
CSTF2TQ9H0L4 IFRD1-210ENST00000462155 437 ntTSL 56.3□□□□□ -1.41e-6■■■■□ 22.8
CSTF2TQ9H0L4 ZFAND1-216ENST00000521885 568 ntTSL 46.24□□□□□ -1.411e-6■■■■□ 22.8
CSTF2TQ9H0L4 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.23□□□□□ -1.411e-6■■■■□ 22.8
CSTF2TQ9H0L4 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.16□□□□□ -1.421e-6■■■■□ 22.8
CSTF2TQ9H0L4 ZFAND1-211ENST00000520604 664 ntTSL 36.03□□□□□ -1.441e-6■■■■□ 22.8
CSTF2TQ9H0L4 ZFAND1-212ENST00000520635 882 ntTSL 56.03□□□□□ -1.441e-6■■■■□ 22.8
CSTF2TQ9H0L4 ZFAND1-215ENST00000521742 614 ntTSL 35.93□□□□□ -1.461e-6■■■■□ 22.8
CSTF2TQ9H0L4 GMDS-209ENST00000531690 515 ntTSL 55.79□□□□□ -1.481e-7■■■■□ 22.8
CSTF2TQ9H0L4 IFRD1-215ENST00000489994 1721 ntTSL 1 (best)5.63□□□□□ -1.511e-6■■■■□ 22.8
CSTF2TQ9H0L4 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.511e-6■■■■□ 22.8
CSTF2TQ9H0L4 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.51□□□□□ -1.531e-6■■■■□ 22.8
CSTF2TQ9H0L4 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.591e-6■■■■□ 22.8
CSTF2TQ9H0L4 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.22□□□□□ -1.731e-6■■■■□ 22.8
CSTF2TQ9H0L4 CEP120-205ENST00000508138 4720 ntTSL 1 (best)3.96□□□□□ -1.781e-6■■■■□ 22.8
CSTF2TQ9H0L4 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.49■□□□□ 0.392e-7■■■■□ 22.8
CSTF2TQ9H0L4 DHRS3-201ENST00000430996 826 ntTSL 317.48■□□□□ 0.396e-7■■■■□ 22.8
CSTF2TQ9H0L4 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.395e-7■■■■□ 22.8
CSTF2TQ9H0L4 DHRS3-203ENST00000482265 1036 ntTSL 314.12□□□□□ -0.155e-7■■■■□ 22.8
CSTF2TQ9H0L4 DHRS3-202ENST00000464917 539 ntTSL 312.47□□□□□ -0.415e-7■■■■□ 22.8
CSTF2TQ9H0L4 MICALL2-210ENST00000482839 852 ntTSL 214.35□□□□□ -0.112e-7■■■■□ 22.8
CSTF2TQ9H0L4 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.383e-6■■■■□ 22.8
CSTF2TQ9H0L4 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.85■□□□□ 0.293e-6■■■■□ 22.8
CSTF2TQ9H0L4 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.97■□□□□ 0.153e-6■■■■□ 22.8
CSTF2TQ9H0L4 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.89■□□□□ 0.133e-6■■■■□ 22.8
CSTF2TQ9H0L4 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.49■□□□□ 0.073e-6■■■■□ 22.8
CSTF2TQ9H0L4 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.37■□□□□ 0.053e-6■■■■□ 22.8
CSTF2TQ9H0L4 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.71□□□□□ -0.063e-6■■■■□ 22.8
CSTF2TQ9H0L4 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.414e-7■■■■□ 22.8
CSTF2TQ9H0L4 KRT8-210ENST00000548998 918 ntTSL 516.9■□□□□ 0.34e-7■■■■□ 22.8
CSTF2TQ9H0L4 KRT8-204ENST00000546826 1165 ntTSL 515.89■□□□□ 0.134e-7■■■■□ 22.8
CSTF2TQ9H0L4 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.064e-7■■■■□ 22.8
CSTF2TQ9H0L4 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.71■□□□□ 0.435e-7■■■■□ 22.8
CSTF2TQ9H0L4 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.395e-7■■■■□ 22.8
CSTF2TQ9H0L4 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.11e-6■■■■□ 22.7
CSTF2TQ9H0L4 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21e-6■■■■□ 22.7
CSTF2TQ9H0L4 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.211e-6■■■■□ 22.7
CSTF2TQ9H0L4 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.24□□□□□ -0.133e-7■■■■□ 22.7
CSTF2TQ9H0L4 TMCO3-204ENST00000462877 491 ntTSL 27.58□□□□□ -1.23e-7■■■■□ 22.7
CSTF2TQ9H0L4 PTGS1-204ENST00000426608 468 ntTSL 512.19□□□□□ -0.468e-7■■■■□ 22.7
CSTF2TQ9H0L4 PTGS1-201ENST00000223423 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.618e-7■■■■□ 22.7
CSTF2TQ9H0L4 PTGS1-206ENST00000614910 4894 ntTSL 3 BASIC10.26□□□□□ -0.778e-7■■■■□ 22.7
CSTF2TQ9H0L4 PTGS1-202ENST00000362012 4964 ntAPPRIS P4 TSL 1 (best) BASIC9.97□□□□□ -0.818e-7■■■■□ 22.7
CSTF2TQ9H0L4 PTGS1-205ENST00000540753 5375 ntTSL 2 BASIC9.74□□□□□ -0.858e-7■■■■□ 22.7
Retrieved 100 of 19,151 protein–RNA pairs in 186.2 ms