Protein–RNA interactions for Protein: Q9BRF8

CPPED1, Serine/threonine-protein phosphatase CPPED1, humanhuman

Predicted RBP Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPPED1Q9BRF8 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CPPED1Q9BRF8 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPPED1Q9BRF8 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CPPED1Q9BRF8 SRD5A1P1-201ENST00000442297 786 ntBASIC20.06■□□□□ 0.8
CPPED1Q9BRF8 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.06■□□□□ 0.8
CPPED1Q9BRF8 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CPPED1Q9BRF8 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.06■□□□□ 0.8
CPPED1Q9BRF8 AL034346.1-201ENST00000568244 1277 ntBASIC20.06■□□□□ 0.8
CPPED1Q9BRF8 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPPED1Q9BRF8 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPPED1Q9BRF8 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CPPED1Q9BRF8 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CPPED1Q9BRF8 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPPED1Q9BRF8 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPPED1Q9BRF8 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPPED1Q9BRF8 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CPPED1Q9BRF8 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPPED1Q9BRF8 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CPPED1Q9BRF8 AL512631.2-201ENST00000604634 923 ntBASIC20.05■□□□□ 0.8
CPPED1Q9BRF8 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.05■□□□□ 0.8
CPPED1Q9BRF8 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPPED1Q9BRF8 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.05■□□□□ 0.8
CPPED1Q9BRF8 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPPED1Q9BRF8 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPPED1Q9BRF8 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPPED1Q9BRF8 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPPED1Q9BRF8 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPPED1Q9BRF8 AC003102.1-202ENST00000563394 1796 ntBASIC20.04■□□□□ 0.8
CPPED1Q9BRF8 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPPED1Q9BRF8 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPPED1Q9BRF8 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.04■□□□□ 0.8
CPPED1Q9BRF8 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CPPED1Q9BRF8 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.04■□□□□ 0.8
CPPED1Q9BRF8 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPPED1Q9BRF8 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPPED1Q9BRF8 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPPED1Q9BRF8 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPPED1Q9BRF8 AL049796.1-201ENST00000565336 1766 ntBASIC20.03■□□□□ 0.8
CPPED1Q9BRF8 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CPPED1Q9BRF8 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPPED1Q9BRF8 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.03■□□□□ 0.8
CPPED1Q9BRF8 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CPPED1Q9BRF8 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.03■□□□□ 0.8
CPPED1Q9BRF8 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CPPED1Q9BRF8 AC092171.4-201ENST00000609130 632 ntBASIC20.03■□□□□ 0.8
CPPED1Q9BRF8 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPPED1Q9BRF8 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CPPED1Q9BRF8 LINC01521-201ENST00000504184 1943 ntBASIC20.03■□□□□ 0.8
CPPED1Q9BRF8 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CPPED1Q9BRF8 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CPPED1Q9BRF8 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPPED1Q9BRF8 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CPPED1Q9BRF8 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPPED1Q9BRF8 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CPPED1Q9BRF8 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CPPED1Q9BRF8 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CPPED1Q9BRF8 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CPPED1Q9BRF8 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CPPED1Q9BRF8 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
CPPED1Q9BRF8 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CPPED1Q9BRF8 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.02■□□□□ 0.8
CPPED1Q9BRF8 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CPPED1Q9BRF8 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CPPED1Q9BRF8 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.02■□□□□ 0.8
CPPED1Q9BRF8 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CPPED1Q9BRF8 GUSBP5-201ENST00000418136 578 ntBASIC20.02■□□□□ 0.8
CPPED1Q9BRF8 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.02■□□□□ 0.8
CPPED1Q9BRF8 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.02■□□□□ 0.8
CPPED1Q9BRF8 AL035685.1-201ENST00000636663 812 ntBASIC20.02■□□□□ 0.8
CPPED1Q9BRF8 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.02■□□□□ 0.8
CPPED1Q9BRF8 AP004607.7-201ENST00000527152 1677 ntBASIC20.02■□□□□ 0.8
CPPED1Q9BRF8 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.02■□□□□ 0.8
CPPED1Q9BRF8 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.02■□□□□ 0.8
CPPED1Q9BRF8 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CPPED1Q9BRF8 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CPPED1Q9BRF8 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.02■□□□□ 0.79
CPPED1Q9BRF8 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.02■□□□□ 0.79
CPPED1Q9BRF8 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CPPED1Q9BRF8 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.79
CPPED1Q9BRF8 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
CPPED1Q9BRF8 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.01■□□□□ 0.79
CPPED1Q9BRF8 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPPED1Q9BRF8 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.01■□□□□ 0.79
CPPED1Q9BRF8 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CPPED1Q9BRF8 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CPPED1Q9BRF8 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPPED1Q9BRF8 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.01■□□□□ 0.79
CPPED1Q9BRF8 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.01■□□□□ 0.79
CPPED1Q9BRF8 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.01■□□□□ 0.79
CPPED1Q9BRF8 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CPPED1Q9BRF8 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPPED1Q9BRF8 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPPED1Q9BRF8 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
CPPED1Q9BRF8 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CPPED1Q9BRF8 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20■□□□□ 0.79
CPPED1Q9BRF8 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CPPED1Q9BRF8 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CPPED1Q9BRF8 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CPPED1Q9BRF8 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CPPED1Q9BRF8 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms