Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NPAS1Q99742 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NPAS1Q99742 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.43■□□□□ 0.7
NPAS1Q99742 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NPAS1Q99742 YBX1P1-201ENST00000445822 960 ntBASIC19.43■□□□□ 0.7
NPAS1Q99742 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NPAS1Q99742 RARRES2P6-201ENST00000567333 442 ntBASIC19.43■□□□□ 0.7
NPAS1Q99742 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.43■□□□□ 0.7
NPAS1Q99742 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NPAS1Q99742 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.43■□□□□ 0.7
NPAS1Q99742 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
NPAS1Q99742 AC005224.4-201ENST00000583262 1652 ntBASIC19.43■□□□□ 0.7
NPAS1Q99742 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.43■□□□□ 0.7
NPAS1Q99742 LINC00565-201ENST00000562710 2331 ntBASIC19.42■□□□□ 0.7
NPAS1Q99742 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NPAS1Q99742 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
NPAS1Q99742 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NPAS1Q99742 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NPAS1Q99742 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
NPAS1Q99742 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NPAS1Q99742 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
NPAS1Q99742 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NPAS1Q99742 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NPAS1Q99742 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
NPAS1Q99742 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NPAS1Q99742 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.42■□□□□ 0.7
NPAS1Q99742 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NPAS1Q99742 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NPAS1Q99742 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NPAS1Q99742 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NPAS1Q99742 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.41■□□□□ 0.7
NPAS1Q99742 AC010542.4-201ENST00000563151 1910 ntBASIC19.41■□□□□ 0.7
NPAS1Q99742 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.41■□□□□ 0.7
NPAS1Q99742 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.41■□□□□ 0.7
NPAS1Q99742 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NPAS1Q99742 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NPAS1Q99742 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.41■□□□□ 0.7
NPAS1Q99742 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.41■□□□□ 0.7
NPAS1Q99742 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.41■□□□□ 0.7
NPAS1Q99742 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
NPAS1Q99742 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.41■□□□□ 0.7
NPAS1Q99742 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.41■□□□□ 0.7
NPAS1Q99742 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.41■□□□□ 0.7
NPAS1Q99742 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
NPAS1Q99742 AC055733.4-201ENST00000638462 1354 ntBASIC19.41■□□□□ 0.7
NPAS1Q99742 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.41■□□□□ 0.7
NPAS1Q99742 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NPAS1Q99742 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NPAS1Q99742 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NPAS1Q99742 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
NPAS1Q99742 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NPAS1Q99742 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
NPAS1Q99742 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NPAS1Q99742 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
NPAS1Q99742 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.4■□□□□ 0.7
NPAS1Q99742 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
NPAS1Q99742 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NPAS1Q99742 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
NPAS1Q99742 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NPAS1Q99742 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NPAS1Q99742 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NPAS1Q99742 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
NPAS1Q99742 AC097381.1-201ENST00000429019 1296 ntBASIC19.4■□□□□ 0.7
NPAS1Q99742 CCDC92B-201ENST00000575506 885 ntBASIC19.4■□□□□ 0.7
NPAS1Q99742 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NPAS1Q99742 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NPAS1Q99742 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NPAS1Q99742 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NPAS1Q99742 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.4■□□□□ 0.7
NPAS1Q99742 AP006587.3-201ENST00000525742 1516 ntBASIC19.4■□□□□ 0.7
NPAS1Q99742 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.7
NPAS1Q99742 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.39■□□□□ 0.7
NPAS1Q99742 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NPAS1Q99742 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
NPAS1Q99742 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NPAS1Q99742 MIR6821-201ENST00000617625 74 ntBASIC19.39■□□□□ 0.69
NPAS1Q99742 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.39■□□□□ 0.69
NPAS1Q99742 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NPAS1Q99742 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.39■□□□□ 0.69
NPAS1Q99742 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
NPAS1Q99742 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NPAS1Q99742 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
NPAS1Q99742 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NPAS1Q99742 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NPAS1Q99742 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NPAS1Q99742 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NPAS1Q99742 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NPAS1Q99742 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.38■□□□□ 0.69
NPAS1Q99742 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NPAS1Q99742 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NPAS1Q99742 AC123595.1-201ENST00000440769 1046 ntBASIC19.38■□□□□ 0.69
NPAS1Q99742 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
NPAS1Q99742 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NPAS1Q99742 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
NPAS1Q99742 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.38■□□□□ 0.69
NPAS1Q99742 TERF1P2-201ENST00000583350 1212 ntBASIC19.38■□□□□ 0.69
NPAS1Q99742 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.38■□□□□ 0.69
NPAS1Q99742 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
NPAS1Q99742 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
NPAS1Q99742 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms