Protein–RNA interactions for Protein: Q93009

USP7, Ubiquitin carboxyl-terminal hydrolase 7, humanhuman

Predictions only

Length 1,102 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP7Q93009 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.07■□□□□ 0.96
USP7Q93009 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.07■□□□□ 0.96
USP7Q93009 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.07■□□□□ 0.96
USP7Q93009 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP7Q93009 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.06■□□□□ 0.96
USP7Q93009 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
USP7Q93009 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
USP7Q93009 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
USP7Q93009 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.06■□□□□ 0.96
USP7Q93009 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.06■□□□□ 0.96
USP7Q93009 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP7Q93009 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
USP7Q93009 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
USP7Q93009 ID1-201ENST00000376105 1233 ntBASIC21.06■□□□□ 0.96
USP7Q93009 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
USP7Q93009 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
USP7Q93009 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.06■□□□□ 0.96
USP7Q93009 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.06■□□□□ 0.96
USP7Q93009 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.06■□□□□ 0.96
USP7Q93009 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP7Q93009 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP7Q93009 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
USP7Q93009 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP7Q93009 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP7Q93009 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
USP7Q93009 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP7Q93009 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
USP7Q93009 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP7Q93009 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP7Q93009 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
USP7Q93009 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.05■□□□□ 0.96
USP7Q93009 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.05■□□□□ 0.96
USP7Q93009 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP7Q93009 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP7Q93009 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP7Q93009 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.04■□□□□ 0.96
USP7Q93009 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
USP7Q93009 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.04■□□□□ 0.96
USP7Q93009 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP7Q93009 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP7Q93009 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.04■□□□□ 0.96
USP7Q93009 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.04■□□□□ 0.96
USP7Q93009 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP7Q93009 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP7Q93009 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP7Q93009 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.04■□□□□ 0.96
USP7Q93009 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.04■□□□□ 0.96
USP7Q93009 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP7Q93009 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP7Q93009 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
USP7Q93009 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.03■□□□□ 0.96
USP7Q93009 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
USP7Q93009 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP7Q93009 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.03■□□□□ 0.96
USP7Q93009 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP7Q93009 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP7Q93009 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP7Q93009 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.03■□□□□ 0.96
USP7Q93009 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.03■□□□□ 0.96
USP7Q93009 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
USP7Q93009 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
USP7Q93009 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.02■□□□□ 0.96
USP7Q93009 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.02■□□□□ 0.96
USP7Q93009 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.02■□□□□ 0.96
USP7Q93009 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
USP7Q93009 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
USP7Q93009 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
USP7Q93009 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
USP7Q93009 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
USP7Q93009 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP7Q93009 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP7Q93009 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP7Q93009 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP7Q93009 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
USP7Q93009 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP7Q93009 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
USP7Q93009 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
USP7Q93009 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.01■□□□□ 0.95
USP7Q93009 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.01■□□□□ 0.95
USP7Q93009 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.01■□□□□ 0.95
USP7Q93009 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.01■□□□□ 0.95
USP7Q93009 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.01■□□□□ 0.95
USP7Q93009 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.01■□□□□ 0.95
USP7Q93009 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.01■□□□□ 0.95
USP7Q93009 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
USP7Q93009 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
USP7Q93009 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21■□□□□ 0.95
USP7Q93009 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
USP7Q93009 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
USP7Q93009 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21■□□□□ 0.95
USP7Q93009 BID-212ENST00000614949 1988 ntTSL 5 BASIC21■□□□□ 0.95
USP7Q93009 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21■□□□□ 0.95
USP7Q93009 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21■□□□□ 0.95
USP7Q93009 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21■□□□□ 0.95
USP7Q93009 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21■□□□□ 0.95
USP7Q93009 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
USP7Q93009 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
USP7Q93009 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
USP7Q93009 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21■□□□□ 0.95
USP7Q93009 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms