Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
SMARCC2Q8TAQ2 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
SMARCC2Q8TAQ2 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC25.03■■□□□ 1.6
SMARCC2Q8TAQ2 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SMARCC2Q8TAQ2 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC25.03■■□□□ 1.6
SMARCC2Q8TAQ2 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
SMARCC2Q8TAQ2 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC25.03■■□□□ 1.6
SMARCC2Q8TAQ2 MIR6084-201ENST00000622012 110 ntBASIC25.03■■□□□ 1.6
SMARCC2Q8TAQ2 AC105233.4-201ENST00000642045 216 ntBASIC25.03■■□□□ 1.6
SMARCC2Q8TAQ2 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC25.03■■□□□ 1.6
SMARCC2Q8TAQ2 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
SMARCC2Q8TAQ2 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC25.03■■□□□ 1.6
SMARCC2Q8TAQ2 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SMARCC2Q8TAQ2 TUB-203ENST00000534099 1759 ntTSL 2 BASIC25.03■■□□□ 1.6
SMARCC2Q8TAQ2 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC25.03■■□□□ 1.6
SMARCC2Q8TAQ2 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC25.03■■□□□ 1.6
SMARCC2Q8TAQ2 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC25.03■■□□□ 1.6
SMARCC2Q8TAQ2 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
SMARCC2Q8TAQ2 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC25.02■■□□□ 1.6
SMARCC2Q8TAQ2 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
SMARCC2Q8TAQ2 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
SMARCC2Q8TAQ2 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC25.02■■□□□ 1.6
SMARCC2Q8TAQ2 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC25.02■■□□□ 1.6
SMARCC2Q8TAQ2 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
SMARCC2Q8TAQ2 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC25.02■■□□□ 1.6
SMARCC2Q8TAQ2 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SMARCC2Q8TAQ2 AL137060.1-201ENST00000618151 2648 ntBASIC25.01■■□□□ 1.59
SMARCC2Q8TAQ2 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
SMARCC2Q8TAQ2 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SMARCC2Q8TAQ2 AC097381.1-201ENST00000429019 1296 ntBASIC25.01■■□□□ 1.59
SMARCC2Q8TAQ2 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SMARCC2Q8TAQ2 MIR6821-201ENST00000617625 74 ntBASIC25.01■■□□□ 1.59
SMARCC2Q8TAQ2 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SMARCC2Q8TAQ2 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC25.01■■□□□ 1.59
SMARCC2Q8TAQ2 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
SMARCC2Q8TAQ2 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
SMARCC2Q8TAQ2 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC25■■□□□ 1.59
SMARCC2Q8TAQ2 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SMARCC2Q8TAQ2 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC25■■□□□ 1.59
SMARCC2Q8TAQ2 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SMARCC2Q8TAQ2 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC25■■□□□ 1.59
SMARCC2Q8TAQ2 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC25■■□□□ 1.59
SMARCC2Q8TAQ2 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC25■■□□□ 1.59
SMARCC2Q8TAQ2 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SMARCC2Q8TAQ2 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
SMARCC2Q8TAQ2 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SMARCC2Q8TAQ2 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC25■■□□□ 1.59
SMARCC2Q8TAQ2 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC25■■□□□ 1.59
SMARCC2Q8TAQ2 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC25■■□□□ 1.59
SMARCC2Q8TAQ2 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SMARCC2Q8TAQ2 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SMARCC2Q8TAQ2 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SMARCC2Q8TAQ2 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SMARCC2Q8TAQ2 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SMARCC2Q8TAQ2 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC24.99■■□□□ 1.59
SMARCC2Q8TAQ2 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC24.99■■□□□ 1.59
SMARCC2Q8TAQ2 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
SMARCC2Q8TAQ2 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC24.99■■□□□ 1.59
SMARCC2Q8TAQ2 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC24.99■■□□□ 1.59
SMARCC2Q8TAQ2 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC24.99■■□□□ 1.59
SMARCC2Q8TAQ2 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
SMARCC2Q8TAQ2 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
SMARCC2Q8TAQ2 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SMARCC2Q8TAQ2 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC24.99■■□□□ 1.59
SMARCC2Q8TAQ2 EFS-203ENST00000429593 2610 ntTSL 2 BASIC24.99■■□□□ 1.59
SMARCC2Q8TAQ2 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SMARCC2Q8TAQ2 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC24.98■■□□□ 1.59
SMARCC2Q8TAQ2 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC24.98■■□□□ 1.59
SMARCC2Q8TAQ2 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC24.98■■□□□ 1.59
SMARCC2Q8TAQ2 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SMARCC2Q8TAQ2 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
SMARCC2Q8TAQ2 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC24.98■■□□□ 1.59
SMARCC2Q8TAQ2 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
SMARCC2Q8TAQ2 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SMARCC2Q8TAQ2 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC24.98■■□□□ 1.59
SMARCC2Q8TAQ2 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
SMARCC2Q8TAQ2 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SMARCC2Q8TAQ2 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC24.98■■□□□ 1.59
SMARCC2Q8TAQ2 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SMARCC2Q8TAQ2 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
SMARCC2Q8TAQ2 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC24.97■■□□□ 1.59
SMARCC2Q8TAQ2 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC24.97■■□□□ 1.59
SMARCC2Q8TAQ2 AC027612.3-201ENST00000413684 1047 ntBASIC24.97■■□□□ 1.59
SMARCC2Q8TAQ2 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC24.97■■□□□ 1.59
SMARCC2Q8TAQ2 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC24.97■■□□□ 1.59
SMARCC2Q8TAQ2 AC087623.3-201ENST00000607047 1098 ntBASIC24.97■■□□□ 1.59
SMARCC2Q8TAQ2 MIR5787-201ENST00000611784 55 ntBASIC24.97■■□□□ 1.59
SMARCC2Q8TAQ2 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC24.97■■□□□ 1.59
SMARCC2Q8TAQ2 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC24.97■■□□□ 1.59
SMARCC2Q8TAQ2 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SMARCC2Q8TAQ2 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SMARCC2Q8TAQ2 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC24.96■■□□□ 1.59
SMARCC2Q8TAQ2 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC24.96■■□□□ 1.59
SMARCC2Q8TAQ2 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
SMARCC2Q8TAQ2 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
SMARCC2Q8TAQ2 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
SMARCC2Q8TAQ2 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
SMARCC2Q8TAQ2 MPST-204ENST00000404393 1329 ntTSL 5 BASIC24.96■■□□□ 1.59
SMARCC2Q8TAQ2 PLD4-205ENST00000553861 667 ntTSL 2 BASIC24.96■■□□□ 1.59
SMARCC2Q8TAQ2 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC24.96■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms