Protein–RNA interactions for Protein: Q8NG48

LINS1, Protein Lines homolog 1, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINS1Q8NG48 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC26.86■■□□□ 1.89
LINS1Q8NG48 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
LINS1Q8NG48 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
LINS1Q8NG48 AC080038.1-201ENST00000611274 1154 ntBASIC26.86■■□□□ 1.89
LINS1Q8NG48 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
LINS1Q8NG48 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
LINS1Q8NG48 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
LINS1Q8NG48 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
LINS1Q8NG48 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC26.85■■□□□ 1.89
LINS1Q8NG48 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
LINS1Q8NG48 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
LINS1Q8NG48 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC26.85■■□□□ 1.89
LINS1Q8NG48 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC26.85■■□□□ 1.89
LINS1Q8NG48 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
LINS1Q8NG48 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC26.85■■□□□ 1.89
LINS1Q8NG48 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
LINS1Q8NG48 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC26.85■■□□□ 1.89
LINS1Q8NG48 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
LINS1Q8NG48 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
LINS1Q8NG48 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
LINS1Q8NG48 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
LINS1Q8NG48 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
LINS1Q8NG48 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
LINS1Q8NG48 AC003102.1-202ENST00000563394 1796 ntBASIC26.84■■□□□ 1.89
LINS1Q8NG48 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
LINS1Q8NG48 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC26.84■■□□□ 1.89
LINS1Q8NG48 AC242852.2-201ENST00000615738 1807 ntBASIC26.84■■□□□ 1.89
LINS1Q8NG48 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
LINS1Q8NG48 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
LINS1Q8NG48 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
LINS1Q8NG48 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
LINS1Q8NG48 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC26.84■■□□□ 1.89
LINS1Q8NG48 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC26.84■■□□□ 1.89
LINS1Q8NG48 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC26.84■■□□□ 1.89
LINS1Q8NG48 BID-214ENST00000617586 542 ntTSL 5 BASIC26.84■■□□□ 1.89
LINS1Q8NG48 TFG-210ENST00000620299 1289 ntTSL 5 BASIC26.84■■□□□ 1.89
LINS1Q8NG48 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
LINS1Q8NG48 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
LINS1Q8NG48 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
LINS1Q8NG48 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
LINS1Q8NG48 AC233723.2-201ENST00000623798 2106 ntBASIC26.84■■□□□ 1.89
LINS1Q8NG48 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
LINS1Q8NG48 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC26.84■■□□□ 1.89
LINS1Q8NG48 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
LINS1Q8NG48 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
LINS1Q8NG48 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC26.83■■□□□ 1.89
LINS1Q8NG48 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
LINS1Q8NG48 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
LINS1Q8NG48 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC26.83■■□□□ 1.89
LINS1Q8NG48 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC26.83■■□□□ 1.89
LINS1Q8NG48 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC26.83■■□□□ 1.89
LINS1Q8NG48 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC26.83■■□□□ 1.89
LINS1Q8NG48 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC26.83■■□□□ 1.89
LINS1Q8NG48 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC26.82■■□□□ 1.88
LINS1Q8NG48 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
LINS1Q8NG48 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
LINS1Q8NG48 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
LINS1Q8NG48 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
LINS1Q8NG48 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
LINS1Q8NG48 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC26.82■■□□□ 1.88
LINS1Q8NG48 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC26.82■■□□□ 1.88
LINS1Q8NG48 UBE2DNL-204ENST00000602536 740 ntBASIC26.82■■□□□ 1.88
LINS1Q8NG48 RAP2CP1-201ENST00000605103 478 ntBASIC26.82■■□□□ 1.88
LINS1Q8NG48 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC26.82■■□□□ 1.88
LINS1Q8NG48 AC026471.6-201ENST00000622954 1905 ntBASIC26.82■■□□□ 1.88
LINS1Q8NG48 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
LINS1Q8NG48 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
LINS1Q8NG48 GUSBP5-202ENST00000510805 1989 ntBASIC26.82■■□□□ 1.88
LINS1Q8NG48 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
LINS1Q8NG48 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
LINS1Q8NG48 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC26.81■■□□□ 1.88
LINS1Q8NG48 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC26.81■■□□□ 1.88
LINS1Q8NG48 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC26.81■■□□□ 1.88
LINS1Q8NG48 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC26.81■■□□□ 1.88
LINS1Q8NG48 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC26.81■■□□□ 1.88
LINS1Q8NG48 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
LINS1Q8NG48 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
LINS1Q8NG48 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
LINS1Q8NG48 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
LINS1Q8NG48 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC26.8■■□□□ 1.88
LINS1Q8NG48 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC26.8■■□□□ 1.88
LINS1Q8NG48 CDCA4P2-201ENST00000441182 718 ntBASIC26.8■■□□□ 1.88
LINS1Q8NG48 RNF146-206ENST00000480444 843 ntTSL 2 BASIC26.8■■□□□ 1.88
LINS1Q8NG48 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC26.8■■□□□ 1.88
LINS1Q8NG48 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
LINS1Q8NG48 KRT18P20-201ENST00000548986 1279 ntBASIC26.8■■□□□ 1.88
LINS1Q8NG48 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC26.8■■□□□ 1.88
LINS1Q8NG48 MFSD11-216ENST00000590393 1141 ntBASIC26.8■■□□□ 1.88
LINS1Q8NG48 AC011767.1-201ENST00000617410 1153 ntBASIC26.8■■□□□ 1.88
LINS1Q8NG48 AC073111.5-205ENST00000641717 521 ntBASIC26.8■■□□□ 1.88
LINS1Q8NG48 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
LINS1Q8NG48 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC26.8■■□□□ 1.88
LINS1Q8NG48 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
LINS1Q8NG48 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
LINS1Q8NG48 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
LINS1Q8NG48 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC26.79■■□□□ 1.88
LINS1Q8NG48 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
LINS1Q8NG48 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
LINS1Q8NG48 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
LINS1Q8NG48 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms