Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CCDC60Q8IWA6 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
CCDC60Q8IWA6 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
CCDC60Q8IWA6 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CCDC60Q8IWA6 AC010141.2-201ENST00000452426 721 ntBASIC23.83■■□□□ 1.41
CCDC60Q8IWA6 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC23.83■■□□□ 1.41
CCDC60Q8IWA6 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CCDC60Q8IWA6 MFSD11-216ENST00000590393 1141 ntBASIC23.83■■□□□ 1.41
CCDC60Q8IWA6 AC011767.1-201ENST00000617410 1153 ntBASIC23.83■■□□□ 1.41
CCDC60Q8IWA6 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC23.83■■□□□ 1.41
CCDC60Q8IWA6 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC23.83■■□□□ 1.4
CCDC60Q8IWA6 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC23.83■■□□□ 1.4
CCDC60Q8IWA6 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
CCDC60Q8IWA6 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC60Q8IWA6 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC23.82■■□□□ 1.4
CCDC60Q8IWA6 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC60Q8IWA6 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC60Q8IWA6 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC60Q8IWA6 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC23.82■■□□□ 1.4
CCDC60Q8IWA6 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC23.82■■□□□ 1.4
CCDC60Q8IWA6 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC60Q8IWA6 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC23.82■■□□□ 1.4
CCDC60Q8IWA6 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC60Q8IWA6 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC60Q8IWA6 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC60Q8IWA6 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC23.82■■□□□ 1.4
CCDC60Q8IWA6 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.82■■□□□ 1.4
CCDC60Q8IWA6 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC23.81■■□□□ 1.4
CCDC60Q8IWA6 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC60Q8IWA6 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC60Q8IWA6 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC60Q8IWA6 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC60Q8IWA6 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC23.81■■□□□ 1.4
CCDC60Q8IWA6 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC23.81■■□□□ 1.4
CCDC60Q8IWA6 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC60Q8IWA6 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC60Q8IWA6 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC23.81■■□□□ 1.4
CCDC60Q8IWA6 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC60Q8IWA6 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC60Q8IWA6 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
CCDC60Q8IWA6 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC60Q8IWA6 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC60Q8IWA6 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC23.8■■□□□ 1.4
CCDC60Q8IWA6 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC23.8■■□□□ 1.4
CCDC60Q8IWA6 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC60Q8IWA6 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
CCDC60Q8IWA6 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC23.8■■□□□ 1.4
CCDC60Q8IWA6 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC23.8■■□□□ 1.4
CCDC60Q8IWA6 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC23.8■■□□□ 1.4
CCDC60Q8IWA6 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC60Q8IWA6 AC053503.5-201ENST00000601508 636 ntBASIC23.8■■□□□ 1.4
CCDC60Q8IWA6 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC23.8■■□□□ 1.4
CCDC60Q8IWA6 AC026471.6-201ENST00000622954 1905 ntBASIC23.8■■□□□ 1.4
CCDC60Q8IWA6 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC23.8■■□□□ 1.4
CCDC60Q8IWA6 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC60Q8IWA6 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC23.79■■□□□ 1.4
CCDC60Q8IWA6 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC60Q8IWA6 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC60Q8IWA6 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC23.79■■□□□ 1.4
CCDC60Q8IWA6 AC068473.5-201ENST00000616428 2072 ntBASIC23.79■■□□□ 1.4
CCDC60Q8IWA6 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC60Q8IWA6 PARP1-202ENST00000366792 553 ntTSL 3 BASIC23.79■■□□□ 1.4
CCDC60Q8IWA6 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
CCDC60Q8IWA6 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC23.79■■□□□ 1.4
CCDC60Q8IWA6 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC23.79■■□□□ 1.4
CCDC60Q8IWA6 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC23.79■■□□□ 1.4
CCDC60Q8IWA6 TFG-210ENST00000620299 1289 ntTSL 5 BASIC23.79■■□□□ 1.4
CCDC60Q8IWA6 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC60Q8IWA6 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC60Q8IWA6 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC60Q8IWA6 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC60Q8IWA6 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC60Q8IWA6 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC60Q8IWA6 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC23.78■■□□□ 1.4
CCDC60Q8IWA6 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC23.78■■□□□ 1.4
CCDC60Q8IWA6 MYCNOS-205ENST00000641950 531 ntBASIC23.78■■□□□ 1.4
CCDC60Q8IWA6 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC60Q8IWA6 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC60Q8IWA6 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC23.78■■□□□ 1.4
CCDC60Q8IWA6 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC60Q8IWA6 AC003102.1-202ENST00000563394 1796 ntBASIC23.78■■□□□ 1.4
CCDC60Q8IWA6 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC23.78■■□□□ 1.4
CCDC60Q8IWA6 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC60Q8IWA6 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC23.77■■□□□ 1.4
CCDC60Q8IWA6 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC60Q8IWA6 NAA20-201ENST00000310450 920 ntTSL 2 BASIC23.77■■□□□ 1.4
CCDC60Q8IWA6 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC23.77■■□□□ 1.4
CCDC60Q8IWA6 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
CCDC60Q8IWA6 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC60Q8IWA6 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC60Q8IWA6 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC60Q8IWA6 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC60Q8IWA6 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC60Q8IWA6 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC60Q8IWA6 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC60Q8IWA6 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC60Q8IWA6 AC026185.1-201ENST00000445748 174 ntBASIC23.76■■□□□ 1.39
CCDC60Q8IWA6 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC23.76■■□□□ 1.39
CCDC60Q8IWA6 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC23.76■■□□□ 1.39
CCDC60Q8IWA6 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms