Protein–RNA interactions for Protein: Q86YC2

PALB2, Partner and localizer of BRCA2, humanhuman

Predictions only

Length 1,186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2Q86YC2 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PALB2Q86YC2 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC23.27■■□□□ 1.32
PALB2Q86YC2 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC23.27■■□□□ 1.32
PALB2Q86YC2 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PALB2Q86YC2 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PALB2Q86YC2 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
PALB2Q86YC2 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PALB2Q86YC2 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC23.26■■□□□ 1.31
PALB2Q86YC2 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PALB2Q86YC2 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
PALB2Q86YC2 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
PALB2Q86YC2 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PALB2Q86YC2 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC23.26■■□□□ 1.31
PALB2Q86YC2 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
PALB2Q86YC2 COX20-201ENST00000366528 568 ntTSL 2 BASIC23.26■■□□□ 1.31
PALB2Q86YC2 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PALB2Q86YC2 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC23.26■■□□□ 1.31
PALB2Q86YC2 BX005040.4-201ENST00000637145 1518 ntBASIC23.26■■□□□ 1.31
PALB2Q86YC2 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
PALB2Q86YC2 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
PALB2Q86YC2 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC23.26■■□□□ 1.31
PALB2Q86YC2 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC23.26■■□□□ 1.31
PALB2Q86YC2 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PALB2Q86YC2 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PALB2Q86YC2 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PALB2Q86YC2 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC23.25■■□□□ 1.31
PALB2Q86YC2 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
PALB2Q86YC2 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC23.25■■□□□ 1.31
PALB2Q86YC2 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC23.25■■□□□ 1.31
PALB2Q86YC2 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC23.25■■□□□ 1.31
PALB2Q86YC2 AC137761.2-201ENST00000561729 223 ntBASIC23.25■■□□□ 1.31
PALB2Q86YC2 AC145350.3-201ENST00000569033 163 ntBASIC23.25■■□□□ 1.31
PALB2Q86YC2 AC068587.7-201ENST00000641602 218 ntBASIC23.25■■□□□ 1.31
PALB2Q86YC2 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC23.25■■□□□ 1.31
PALB2Q86YC2 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PALB2Q86YC2 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PALB2Q86YC2 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
PALB2Q86YC2 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC23.24■■□□□ 1.31
PALB2Q86YC2 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PALB2Q86YC2 AC016769.1-201ENST00000409132 1010 ntBASIC23.24■■□□□ 1.31
PALB2Q86YC2 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC23.24■■□□□ 1.31
PALB2Q86YC2 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
PALB2Q86YC2 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC23.24■■□□□ 1.31
PALB2Q86YC2 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
PALB2Q86YC2 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
PALB2Q86YC2 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
PALB2Q86YC2 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PALB2Q86YC2 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC23.24■■□□□ 1.31
PALB2Q86YC2 AC007375.3-201ENST00000600936 2314 ntBASIC23.24■■□□□ 1.31
PALB2Q86YC2 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PALB2Q86YC2 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PALB2Q86YC2 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PALB2Q86YC2 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC23.23■■□□□ 1.31
PALB2Q86YC2 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC23.23■■□□□ 1.31
PALB2Q86YC2 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC23.23■■□□□ 1.31
PALB2Q86YC2 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC23.23■■□□□ 1.31
PALB2Q86YC2 AC010141.3-201ENST00000456659 717 ntBASIC23.23■■□□□ 1.31
PALB2Q86YC2 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC23.23■■□□□ 1.31
PALB2Q86YC2 AC080038.1-201ENST00000611274 1154 ntBASIC23.23■■□□□ 1.31
PALB2Q86YC2 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PALB2Q86YC2 AC087239.1-201ENST00000622671 572 ntBASIC23.23■■□□□ 1.31
PALB2Q86YC2 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PALB2Q86YC2 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC23.23■■□□□ 1.31
PALB2Q86YC2 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC23.22■■□□□ 1.31
PALB2Q86YC2 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
PALB2Q86YC2 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
PALB2Q86YC2 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
PALB2Q86YC2 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PALB2Q86YC2 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PALB2Q86YC2 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PALB2Q86YC2 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
PALB2Q86YC2 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC23.22■■□□□ 1.31
PALB2Q86YC2 SMUG1P1-201ENST00000590640 811 ntBASIC23.22■■□□□ 1.31
PALB2Q86YC2 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC23.22■■□□□ 1.31
PALB2Q86YC2 AC004854.2-201ENST00000608450 1441 ntBASIC23.22■■□□□ 1.31
PALB2Q86YC2 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PALB2Q86YC2 AP004607.4-201ENST00000530158 1459 ntBASIC23.22■■□□□ 1.31
PALB2Q86YC2 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PALB2Q86YC2 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC23.21■■□□□ 1.31
PALB2Q86YC2 AC006015.1-201ENST00000429970 570 ntBASIC23.21■■□□□ 1.31
PALB2Q86YC2 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PALB2Q86YC2 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC23.21■■□□□ 1.31
PALB2Q86YC2 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC23.21■■□□□ 1.31
PALB2Q86YC2 FBXW4P1-201ENST00000426721 2239 ntBASIC23.2■■□□□ 1.3
PALB2Q86YC2 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PALB2Q86YC2 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC23.2■■□□□ 1.3
PALB2Q86YC2 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC23.2■■□□□ 1.3
PALB2Q86YC2 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
PALB2Q86YC2 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PALB2Q86YC2 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC23.2■■□□□ 1.3
PALB2Q86YC2 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PALB2Q86YC2 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PALB2Q86YC2 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PALB2Q86YC2 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC23.2■■□□□ 1.3
PALB2Q86YC2 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC23.2■■□□□ 1.3
PALB2Q86YC2 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC23.2■■□□□ 1.3
PALB2Q86YC2 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PALB2Q86YC2 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PALB2Q86YC2 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PALB2Q86YC2 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms