Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.87■□□□□ 0.61
Rpp38Q80UU2 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rpp38Q80UU2 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rpp38Q80UU2 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rpp38Q80UU2 Gm18284-201ENSMUST00000172604 624 ntBASIC18.87■□□□□ 0.61
Rpp38Q80UU2 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rpp38Q80UU2 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rpp38Q80UU2 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.87■□□□□ 0.61
Rpp38Q80UU2 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rpp38Q80UU2 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rpp38Q80UU2 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rpp38Q80UU2 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Rpp38Q80UU2 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rpp38Q80UU2 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rpp38Q80UU2 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.86■□□□□ 0.61
Rpp38Q80UU2 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rpp38Q80UU2 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rpp38Q80UU2 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Rpp38Q80UU2 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rpp38Q80UU2 Gm42642-201ENSMUST00000200683 355 ntBASIC18.86■□□□□ 0.61
Rpp38Q80UU2 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rpp38Q80UU2 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rpp38Q80UU2 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rpp38Q80UU2 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rpp38Q80UU2 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rpp38Q80UU2 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rpp38Q80UU2 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rpp38Q80UU2 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rpp38Q80UU2 Golph3-205ENSMUST00000228671 2842 ntBASIC18.85■□□□□ 0.61
Rpp38Q80UU2 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rpp38Q80UU2 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rpp38Q80UU2 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rpp38Q80UU2 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Rpp38Q80UU2 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rpp38Q80UU2 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.85■□□□□ 0.61
Rpp38Q80UU2 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rpp38Q80UU2 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rpp38Q80UU2 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.84■□□□□ 0.61
Rpp38Q80UU2 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rpp38Q80UU2 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rpp38Q80UU2 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rpp38Q80UU2 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rpp38Q80UU2 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
Rpp38Q80UU2 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.84■□□□□ 0.61
Rpp38Q80UU2 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.84■□□□□ 0.61
Rpp38Q80UU2 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.84■□□□□ 0.61
Rpp38Q80UU2 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rpp38Q80UU2 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rpp38Q80UU2 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rpp38Q80UU2 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rpp38Q80UU2 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.84■□□□□ 0.61
Rpp38Q80UU2 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rpp38Q80UU2 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rpp38Q80UU2 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rpp38Q80UU2 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.61
Rpp38Q80UU2 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rpp38Q80UU2 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rpp38Q80UU2 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Rpp38Q80UU2 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.83■□□□□ 0.6
Rpp38Q80UU2 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.83■□□□□ 0.6
Rpp38Q80UU2 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Rpp38Q80UU2 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rpp38Q80UU2 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rpp38Q80UU2 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rpp38Q80UU2 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rpp38Q80UU2 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rpp38Q80UU2 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rpp38Q80UU2 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rpp38Q80UU2 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rpp38Q80UU2 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rpp38Q80UU2 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.82■□□□□ 0.6
Rpp38Q80UU2 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rpp38Q80UU2 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
Rpp38Q80UU2 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rpp38Q80UU2 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
Rpp38Q80UU2 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rpp38Q80UU2 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.82■□□□□ 0.6
Rpp38Q80UU2 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rpp38Q80UU2 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rpp38Q80UU2 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rpp38Q80UU2 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rpp38Q80UU2 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.81■□□□□ 0.6
Rpp38Q80UU2 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rpp38Q80UU2 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rpp38Q80UU2 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rpp38Q80UU2 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rpp38Q80UU2 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rpp38Q80UU2 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rpp38Q80UU2 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rpp38Q80UU2 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rpp38Q80UU2 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rpp38Q80UU2 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rpp38Q80UU2 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rpp38Q80UU2 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rpp38Q80UU2 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.8■□□□□ 0.6
Rpp38Q80UU2 Gm18671-201ENSMUST00000214826 683 ntBASIC18.8■□□□□ 0.6
Rpp38Q80UU2 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
Rpp38Q80UU2 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.8■□□□□ 0.6
Rpp38Q80UU2 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rpp38Q80UU2 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms