Protein–RNA interactions for Protein: Q6PJG6

BRAT1, BRCA1-associated ATM activator 1, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1Q6PJG6 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.42■■□□□ 1.02
BRAT1Q6PJG6 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.42■■□□□ 1.02
BRAT1Q6PJG6 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
BRAT1Q6PJG6 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.42■■□□□ 1.02
BRAT1Q6PJG6 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
BRAT1Q6PJG6 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.41■■□□□ 1.02
BRAT1Q6PJG6 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
BRAT1Q6PJG6 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
BRAT1Q6PJG6 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
BRAT1Q6PJG6 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
BRAT1Q6PJG6 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
BRAT1Q6PJG6 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
BRAT1Q6PJG6 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.41■■□□□ 1.02
BRAT1Q6PJG6 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.41■■□□□ 1.02
BRAT1Q6PJG6 AC104187.1-201ENST00000607510 612 ntBASIC21.41■■□□□ 1.02
BRAT1Q6PJG6 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
BRAT1Q6PJG6 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
BRAT1Q6PJG6 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
BRAT1Q6PJG6 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
BRAT1Q6PJG6 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.4■■□□□ 1.02
BRAT1Q6PJG6 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
BRAT1Q6PJG6 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
BRAT1Q6PJG6 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
BRAT1Q6PJG6 ECEL1P1-201ENST00000373592 1742 ntBASIC21.4■■□□□ 1.02
BRAT1Q6PJG6 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
BRAT1Q6PJG6 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.4■■□□□ 1.02
BRAT1Q6PJG6 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
BRAT1Q6PJG6 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
BRAT1Q6PJG6 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.4■■□□□ 1.02
BRAT1Q6PJG6 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
BRAT1Q6PJG6 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
BRAT1Q6PJG6 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
BRAT1Q6PJG6 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
BRAT1Q6PJG6 AC137761.2-201ENST00000561729 223 ntBASIC21.39■■□□□ 1.01
BRAT1Q6PJG6 EEF1DP3-203ENST00000566025 782 ntBASIC21.39■■□□□ 1.01
BRAT1Q6PJG6 AC145350.3-201ENST00000569033 163 ntBASIC21.39■■□□□ 1.01
BRAT1Q6PJG6 AC053503.5-201ENST00000601508 636 ntBASIC21.39■■□□□ 1.01
BRAT1Q6PJG6 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
BRAT1Q6PJG6 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
BRAT1Q6PJG6 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
BRAT1Q6PJG6 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
BRAT1Q6PJG6 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
BRAT1Q6PJG6 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
BRAT1Q6PJG6 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
BRAT1Q6PJG6 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.38■■□□□ 1.01
BRAT1Q6PJG6 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
BRAT1Q6PJG6 FAM99A-202ENST00000538190 1989 ntBASIC21.38■■□□□ 1.01
BRAT1Q6PJG6 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
BRAT1Q6PJG6 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
BRAT1Q6PJG6 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.38■■□□□ 1.01
BRAT1Q6PJG6 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.38■■□□□ 1.01
BRAT1Q6PJG6 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.38■■□□□ 1.01
BRAT1Q6PJG6 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.38■■□□□ 1.01
BRAT1Q6PJG6 AL137784.2-201ENST00000607332 1000 ntBASIC21.38■■□□□ 1.01
BRAT1Q6PJG6 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
BRAT1Q6PJG6 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
BRAT1Q6PJG6 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
BRAT1Q6PJG6 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
BRAT1Q6PJG6 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
BRAT1Q6PJG6 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
BRAT1Q6PJG6 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
BRAT1Q6PJG6 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.37■■□□□ 1.01
BRAT1Q6PJG6 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
BRAT1Q6PJG6 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
BRAT1Q6PJG6 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.37■■□□□ 1.01
BRAT1Q6PJG6 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.37■■□□□ 1.01
BRAT1Q6PJG6 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
BRAT1Q6PJG6 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
BRAT1Q6PJG6 AC138907.5-202ENST00000569484 235 ntBASIC21.37■■□□□ 1.01
BRAT1Q6PJG6 AC003102.1-202ENST00000563394 1796 ntBASIC21.37■■□□□ 1.01
BRAT1Q6PJG6 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
BRAT1Q6PJG6 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
BRAT1Q6PJG6 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
BRAT1Q6PJG6 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
BRAT1Q6PJG6 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
BRAT1Q6PJG6 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
BRAT1Q6PJG6 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
BRAT1Q6PJG6 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.36■■□□□ 1.01
BRAT1Q6PJG6 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
BRAT1Q6PJG6 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.36■■□□□ 1.01
BRAT1Q6PJG6 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.36■■□□□ 1.01
BRAT1Q6PJG6 AC133561.1-201ENST00000568600 2415 ntBASIC21.36■■□□□ 1.01
BRAT1Q6PJG6 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
BRAT1Q6PJG6 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
BRAT1Q6PJG6 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
BRAT1Q6PJG6 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
BRAT1Q6PJG6 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.36■■□□□ 1.01
BRAT1Q6PJG6 AC016769.1-201ENST00000409132 1010 ntBASIC21.36■■□□□ 1.01
BRAT1Q6PJG6 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.36■■□□□ 1.01
BRAT1Q6PJG6 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.36■■□□□ 1.01
BRAT1Q6PJG6 IKBKGP1-201ENST00000612193 1073 ntBASIC21.36■■□□□ 1.01
BRAT1Q6PJG6 AC092437.1-201ENST00000624794 1048 ntBASIC21.36■■□□□ 1.01
BRAT1Q6PJG6 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
BRAT1Q6PJG6 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
BRAT1Q6PJG6 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
BRAT1Q6PJG6 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
BRAT1Q6PJG6 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
BRAT1Q6PJG6 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
BRAT1Q6PJG6 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
BRAT1Q6PJG6 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms