Protein–RNA interactions for Protein: Q5R1A4

Trdv2-2, T cell receptor delta variable 2-2 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv2-2Q5R1A4 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trdv2-2Q5R1A4 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC14.41□□□□□ -0.1
Trdv2-2Q5R1A4 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trdv2-2Q5R1A4 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trdv2-2Q5R1A4 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trdv2-2Q5R1A4 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trdv2-2Q5R1A4 Gm35558-201ENSMUST00000222675 2219 ntBASIC14.41□□□□□ -0.1
Trdv2-2Q5R1A4 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trdv2-2Q5R1A4 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Trdv2-2Q5R1A4 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trdv2-2Q5R1A4 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trdv2-2Q5R1A4 Gm18688-201ENSMUST00000204695 1859 ntBASIC14.4□□□□□ -0.1
Trdv2-2Q5R1A4 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trdv2-2Q5R1A4 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trdv2-2Q5R1A4 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trdv2-2Q5R1A4 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC14.4□□□□□ -0.1
Trdv2-2Q5R1A4 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trdv2-2Q5R1A4 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC14.4□□□□□ -0.1
Trdv2-2Q5R1A4 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trdv2-2Q5R1A4 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trdv2-2Q5R1A4 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC14.4□□□□□ -0.1
Trdv2-2Q5R1A4 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trdv2-2Q5R1A4 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trdv2-2Q5R1A4 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trdv2-2Q5R1A4 Gm6627-201ENSMUST00000218299 2386 ntBASIC14.4□□□□□ -0.1
Trdv2-2Q5R1A4 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trdv2-2Q5R1A4 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trdv2-2Q5R1A4 Gm6085-201ENSMUST00000182774 1470 ntBASIC14.39□□□□□ -0.11
Trdv2-2Q5R1A4 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC14.39□□□□□ -0.11
Trdv2-2Q5R1A4 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trdv2-2Q5R1A4 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trdv2-2Q5R1A4 Gm45606-201ENSMUST00000209836 2795 ntBASIC14.39□□□□□ -0.11
Trdv2-2Q5R1A4 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trdv2-2Q5R1A4 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC14.39□□□□□ -0.11
Trdv2-2Q5R1A4 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trdv2-2Q5R1A4 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trdv2-2Q5R1A4 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trdv2-2Q5R1A4 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trdv2-2Q5R1A4 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trdv2-2Q5R1A4 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trdv2-2Q5R1A4 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trdv2-2Q5R1A4 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trdv2-2Q5R1A4 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trdv2-2Q5R1A4 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trdv2-2Q5R1A4 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trdv2-2Q5R1A4 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trdv2-2Q5R1A4 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trdv2-2Q5R1A4 Gm43759-201ENSMUST00000196925 1261 ntBASIC14.38□□□□□ -0.11
Trdv2-2Q5R1A4 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trdv2-2Q5R1A4 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trdv2-2Q5R1A4 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trdv2-2Q5R1A4 Grk6-206ENSMUST00000224995 2971 ntBASIC14.38□□□□□ -0.11
Trdv2-2Q5R1A4 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trdv2-2Q5R1A4 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trdv2-2Q5R1A4 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trdv2-2Q5R1A4 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trdv2-2Q5R1A4 Gm19439-201ENSMUST00000198195 2273 ntBASIC14.38□□□□□ -0.11
Trdv2-2Q5R1A4 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trdv2-2Q5R1A4 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trdv2-2Q5R1A4 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trdv2-2Q5R1A4 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trdv2-2Q5R1A4 Rncr4-201ENSMUST00000194541 2234 ntBASIC14.37□□□□□ -0.11
Trdv2-2Q5R1A4 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trdv2-2Q5R1A4 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trdv2-2Q5R1A4 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trdv2-2Q5R1A4 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trdv2-2Q5R1A4 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trdv2-2Q5R1A4 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trdv2-2Q5R1A4 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Trdv2-2Q5R1A4 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trdv2-2Q5R1A4 Gm5522-201ENSMUST00000189483 1242 ntBASIC14.37□□□□□ -0.11
Trdv2-2Q5R1A4 Krt8-ps-201ENSMUST00000208495 945 ntBASIC14.37□□□□□ -0.11
Trdv2-2Q5R1A4 AC154266.1-201ENSMUST00000223190 503 ntBASIC14.37□□□□□ -0.11
Trdv2-2Q5R1A4 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trdv2-2Q5R1A4 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trdv2-2Q5R1A4 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trdv2-2Q5R1A4 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trdv2-2Q5R1A4 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trdv2-2Q5R1A4 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trdv2-2Q5R1A4 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trdv2-2Q5R1A4 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trdv2-2Q5R1A4 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trdv2-2Q5R1A4 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trdv2-2Q5R1A4 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trdv2-2Q5R1A4 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trdv2-2Q5R1A4 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trdv2-2Q5R1A4 Gm8770-201ENSMUST00000121113 1109 ntBASIC14.36□□□□□ -0.11
Trdv2-2Q5R1A4 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trdv2-2Q5R1A4 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trdv2-2Q5R1A4 AC124603.1-201ENSMUST00000223843 308 ntBASIC14.36□□□□□ -0.11
Trdv2-2Q5R1A4 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trdv2-2Q5R1A4 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC14.36□□□□□ -0.11
Trdv2-2Q5R1A4 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trdv2-2Q5R1A4 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trdv2-2Q5R1A4 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trdv2-2Q5R1A4 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trdv2-2Q5R1A4 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trdv2-2Q5R1A4 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trdv2-2Q5R1A4 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Trdv2-2Q5R1A4 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms