Protein–RNA interactions for Protein: Q01477

UBP3, Ubiquitin carboxyl-terminal hydrolase 3, yeastyeast

Known RBP RIP-Chip data

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP3Q01477 YBR242WYBR242W 717 nt4.98□□□□□ -1.61
UBP3Q01477 UBX3YDL091C 1368 nt4.98□□□□□ -1.61
UBP3Q01477 MNR2YKL064W 2910 nt4.98□□□□□ -1.61 RIP-Chip
UBP3Q01477 YML020WYML020W 1995 nt4.98□□□□□ -1.61
UBP3Q01477 DSN1YIR010W 1731 nt4.97□□□□□ -1.61
UBP3Q01477 THI20YOL055C 1656 nt4.97□□□□□ -1.61
UBP3Q01477 CLB3YDL155W 1284 nt4.97□□□□□ -1.61
UBP3Q01477 YEL053W-AYEL053W-A 348 nt4.97□□□□□ -1.61
UBP3Q01477 AGA2YGL032C 264 nt4.97□□□□□ -1.61
UBP3Q01477 RPC37YKR025W 849 nt4.97□□□□□ -1.61
UBP3Q01477 SAP30YMR263W 606 nt4.97□□□□□ -1.61
UBP3Q01477 POP3YNL282W 588 nt4.97□□□□□ -1.61
UBP3Q01477 FYV12YOR183W 390 nt4.97□□□□□ -1.61
UBP3Q01477 ECM23YPL021W 564 nt4.97□□□□□ -1.61
UBP3Q01477 POL30YBR088C 777 nt4.97□□□□□ -1.61
UBP3Q01477 RPB5YBR154C 648 nt4.97□□□□□ -1.61 RIP-Chip
UBP3Q01477 TRM11YOL124C 1302 nt4.97□□□□□ -1.61
UBP3Q01477 LAS21YJL062W 2493 nt4.96□□□□□ -1.62
UBP3Q01477 NTA1YJR062C 1374 nt4.96□□□□□ -1.62
UBP3Q01477 BMH2YDR099W 822 nt4.96□□□□□ -1.62
UBP3Q01477 YGR190CYGR190C 366 nt4.96□□□□□ -1.62
UBP3Q01477 ATX2YOR079C 942 nt4.96□□□□□ -1.62
UBP3Q01477 POF1YCL047C 777 nt4.96□□□□□ -1.62
UBP3Q01477 TRM44YPL030W 1704 nt4.96□□□□□ -1.62
UBP3Q01477 PRM1YNL279W 1986 nt4.96□□□□□ -1.62
UBP3Q01477 PEX29YDR479C 1665 nt4.96□□□□□ -1.62
UBP3Q01477 TRF5YNL299W 1929 nt4.95□□□□□ -1.62 RIP-Chip
UBP3Q01477 YDL032WYDL032W 312 nt4.95□□□□□ -1.62
UBP3Q01477 YDR199WYDR199W 366 nt4.95□□□□□ -1.62
UBP3Q01477 VPS74YDR372C 1038 nt4.95□□□□□ -1.62 RIP-Chip
UBP3Q01477 RPS25AYGR027C 327 nt4.95□□□□□ -1.62
UBP3Q01477 YHR213WYHR213W 597 nt4.95□□□□□ -1.62
UBP3Q01477 YKE4YIL023C 1041 nt4.95□□□□□ -1.62
UBP3Q01477 PEP8YJL053W 1140 nt4.95□□□□□ -1.62
UBP3Q01477 ILM1YJR118C 612 nt4.95□□□□□ -1.62
UBP3Q01477 YAR062WYAR062W 597 nt4.95□□□□□ -1.62
UBP3Q01477 RHO5YNL180C 996 nt4.95□□□□□ -1.62
UBP3Q01477 LEE1YPL054W 906 nt4.95□□□□□ -1.62
UBP3Q01477 ARP9YMR033W 1404 nt4.95□□□□□ -1.62 RIP-Chip
UBP3Q01477 YBR238CYBR238C 2196 nt4.95□□□□□ -1.62
UBP3Q01477 ALO1YML086C 1581 nt4.95□□□□□ -1.62 RIP-Chip
UBP3Q01477 PUB1YNL016W 1362 nt4.94□□□□□ -1.62
UBP3Q01477 PRP28YDR243C 1767 nt4.94□□□□□ -1.62
UBP3Q01477 LAS1YKR063C 1509 nt4.94□□□□□ -1.62
UBP3Q01477 ECM11YDR446W 909 nt4.94□□□□□ -1.62
UBP3Q01477 TSR4YOL022C 1227 nt4.94□□□□□ -1.62
UBP3Q01477 DSS4YPR017C 432 nt4.94□□□□□ -1.62
UBP3Q01477 RAD54YGL163C 2697 nt4.94□□□□□ -1.62
UBP3Q01477 KGD1YIL125W 3045 nt4.94□□□□□ -1.62 RIP-Chip
UBP3Q01477 HCA4YJL033W 2313 nt4.94□□□□□ -1.62
UBP3Q01477 TAF5YBR198C 2397 nt4.93□□□□□ -1.62
UBP3Q01477 YPL260WYPL260W 1656 nt4.93□□□□□ -1.62
UBP3Q01477 MET12YPL023C 1974 nt4.93□□□□□ -1.62
UBP3Q01477 MDR1YGR100W 2853 nt4.93□□□□□ -1.62
UBP3Q01477 YIL115W-AYIL115W-A 372 nt4.93□□□□□ -1.62
UBP3Q01477 ATG27YJL178C 816 nt4.93□□□□□ -1.62
UBP3Q01477 EAF6YJR082C 342 nt4.93□□□□□ -1.62
UBP3Q01477 YAR075WYAR075W 474 nt4.93□□□□□ -1.62
UBP3Q01477 YMR001C-AYMR001C-A 231 nt4.93□□□□□ -1.62
UBP3Q01477 MRPL3YMR024W 1173 nt4.93□□□□□ -1.62
UBP3Q01477 RIM11YMR139W 1113 nt4.93□□□□□ -1.62
UBP3Q01477 POL1YNL102W 4407 nt4.93□□□□□ -1.62
UBP3Q01477 MPD2YOL088C 834 nt4.93□□□□□ -1.62
UBP3Q01477 YPL077CYPL077C 723 nt4.93□□□□□ -1.62
UBP3Q01477 CSM4YPL200W 471 nt4.93□□□□□ -1.62
UBP3Q01477 YOR192C-AYOR192C-A 1317 nt4.93□□□□□ -1.62
UBP3Q01477 YOR343W-AYOR343W-A 1317 nt4.93□□□□□ -1.62
UBP3Q01477 YPL109CYPL109C 1974 nt4.93□□□□□ -1.62
UBP3Q01477 CST9YLR394W 1449 nt4.92□□□□□ -1.62
UBP3Q01477 MIG2YGL209W 1149 nt4.92□□□□□ -1.62
UBP3Q01477 YIL068W-AYIL068W-A 384 nt4.92□□□□□ -1.62
UBP3Q01477 YIL161WYIL161W 708 nt4.92□□□□□ -1.62
UBP3Q01477 YJL133C-AYJL133C-A 225 nt4.92□□□□□ -1.62
UBP3Q01477 YJR020WYJR020W 333 nt4.92□□□□□ -1.62
UBP3Q01477 YKL063CYKL063C 504 nt4.92□□□□□ -1.62
UBP3Q01477 RLP7YNL002C 969 nt4.92□□□□□ -1.62 RIP-Chip
UBP3Q01477 YOR379CYOR379C 339 nt4.92□□□□□ -1.62
UBP3Q01477 FMP23YBR047W 528 nt4.92□□□□□ -1.62
UBP3Q01477 MAG2YLR427W 2013 nt4.92□□□□□ -1.62
UBP3Q01477 SLF1YDR515W 1344 nt4.92□□□□□ -1.62 RIP-Chip
UBP3Q01477 RRN7YJL025W 1545 nt4.92□□□□□ -1.62
UBP3Q01477 SPH1YLR313C 1593 nt4.91□□□□□ -1.62
UBP3Q01477 VID22YLR373C 2706 nt4.91□□□□□ -1.62
UBP3Q01477 ELO2YCR034W 1044 nt4.91□□□□□ -1.62
UBP3Q01477 YER006C-AYER006C-A 318 nt4.91□□□□□ -1.62
UBP3Q01477 YLR400WYLR400W 474 nt4.91□□□□□ -1.62
UBP3Q01477 YML099W-AYML099W-A 330 nt4.91□□□□□ -1.62
UBP3Q01477 YMR193C-AYMR193C-A 387 nt4.91□□□□□ -1.62
UBP3Q01477 YNL109WYNL109W 546 nt4.91□□□□□ -1.62
UBP3Q01477 YOR029WYOR029W 336 nt4.91□□□□□ -1.62
UBP3Q01477 RGS2YOR107W 930 nt4.91□□□□□ -1.62
UBP3Q01477 YBR012CYBR012C 420 nt4.91□□□□□ -1.62
UBP3Q01477 RPS10AYOR293W 318 nt4.91□□□□□ -1.62 RIP-Chip
UBP3Q01477 ACK1YDL203C 1872 nt4.91□□□□□ -1.62
UBP3Q01477 PGM2YMR105C 1710 nt4.91□□□□□ -1.62
UBP3Q01477 RRB1YMR131C 1536 nt4.91□□□□□ -1.62
UBP3Q01477 EPO1YMR124W 2832 nt4.91□□□□□ -1.62 RIP-Chip
UBP3Q01477 CHK1YBR274W 1584 nt4.91□□□□□ -1.62
UBP3Q01477 VPS17YOR132W 1656 nt4.9□□□□□ -1.62
UBP3Q01477 RPP1AYDL081C 321 nt4.9□□□□□ -1.63 RIP-Chip
Retrieved 100 of 7,029 protein–RNA pairs in 25.7 ms