Protein–RNA interactions for Protein: P62820

RAB1A, Ras-related protein Rab-1A, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1AP62820 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB1AP62820 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RAB1AP62820 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
RAB1AP62820 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB1AP62820 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB1AP62820 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
RAB1AP62820 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB1AP62820 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
RAB1AP62820 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RAB1AP62820 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.72■□□□□ 0.59
RAB1AP62820 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.72■□□□□ 0.59
RAB1AP62820 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.72■□□□□ 0.59
RAB1AP62820 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB1AP62820 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RAB1AP62820 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
RAB1AP62820 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
RAB1AP62820 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RAB1AP62820 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB1AP62820 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RAB1AP62820 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB1AP62820 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RAB1AP62820 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RAB1AP62820 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RAB1AP62820 LINC00565-201ENST00000562710 2331 ntBASIC18.71■□□□□ 0.59
RAB1AP62820 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB1AP62820 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
RAB1AP62820 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.71■□□□□ 0.59
RAB1AP62820 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RAB1AP62820 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RAB1AP62820 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RAB1AP62820 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB1AP62820 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
RAB1AP62820 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.71■□□□□ 0.58
RAB1AP62820 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
RAB1AP62820 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RAB1AP62820 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RAB1AP62820 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB1AP62820 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB1AP62820 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.7■□□□□ 0.58
RAB1AP62820 AC123595.1-201ENST00000440769 1046 ntBASIC18.7■□□□□ 0.58
RAB1AP62820 YBX1P1-201ENST00000445822 960 ntBASIC18.7■□□□□ 0.58
RAB1AP62820 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.7■□□□□ 0.58
RAB1AP62820 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.7■□□□□ 0.58
RAB1AP62820 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.7■□□□□ 0.58
RAB1AP62820 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.7■□□□□ 0.58
RAB1AP62820 C11orf96-202ENST00000528572 1834 ntBASIC18.7■□□□□ 0.58
RAB1AP62820 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB1AP62820 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
RAB1AP62820 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
RAB1AP62820 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB1AP62820 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.69■□□□□ 0.58
RAB1AP62820 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB1AP62820 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB1AP62820 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.69■□□□□ 0.58
RAB1AP62820 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.69■□□□□ 0.58
RAB1AP62820 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.69■□□□□ 0.58
RAB1AP62820 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
RAB1AP62820 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RAB1AP62820 FAM99A-202ENST00000538190 1989 ntBASIC18.69■□□□□ 0.58
RAB1AP62820 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB1AP62820 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
RAB1AP62820 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RAB1AP62820 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
RAB1AP62820 AC005224.4-201ENST00000583262 1652 ntBASIC18.69■□□□□ 0.58
RAB1AP62820 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RAB1AP62820 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB1AP62820 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB1AP62820 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB1AP62820 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
RAB1AP62820 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
RAB1AP62820 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB1AP62820 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RAB1AP62820 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
RAB1AP62820 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB1AP62820 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RAB1AP62820 TPRG1LP1-201ENST00000598702 760 ntBASIC18.68■□□□□ 0.58
RAB1AP62820 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB1AP62820 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
RAB1AP62820 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RAB1AP62820 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.68■□□□□ 0.58
RAB1AP62820 LINC02228-203ENST00000641970 1355 ntBASIC18.68■□□□□ 0.58
RAB1AP62820 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.67■□□□□ 0.58
RAB1AP62820 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB1AP62820 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB1AP62820 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RAB1AP62820 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RAB1AP62820 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.67■□□□□ 0.58
RAB1AP62820 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.67■□□□□ 0.58
RAB1AP62820 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
RAB1AP62820 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.67■□□□□ 0.58
RAB1AP62820 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.67■□□□□ 0.58
RAB1AP62820 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.67■□□□□ 0.58
RAB1AP62820 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB1AP62820 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB1AP62820 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB1AP62820 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAB1AP62820 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
RAB1AP62820 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.66■□□□□ 0.58
RAB1AP62820 AP006587.3-201ENST00000525742 1516 ntBASIC18.66■□□□□ 0.58
RAB1AP62820 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms