Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
SMSP52788 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMSP52788 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.91■□□□□ 0.78
SMSP52788 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMSP52788 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SMSP52788 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMSP52788 LINC01960-201ENST00000563759 1884 ntBASIC19.91■□□□□ 0.78
SMSP52788 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.91■□□□□ 0.78
SMSP52788 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMSP52788 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
SMSP52788 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SMSP52788 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.91■□□□□ 0.78
SMSP52788 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMSP52788 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SMSP52788 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMSP52788 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.91■□□□□ 0.78
SMSP52788 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
SMSP52788 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
SMSP52788 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.91■□□□□ 0.78
SMSP52788 AL024507.2-201ENST00000606070 2574 ntBASIC19.9■□□□□ 0.78
SMSP52788 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMSP52788 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMSP52788 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMSP52788 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SMSP52788 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SMSP52788 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.9■□□□□ 0.78
SMSP52788 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.9■□□□□ 0.78
SMSP52788 AC004911.1-201ENST00000416316 871 ntBASIC19.9■□□□□ 0.78
SMSP52788 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.9■□□□□ 0.78
SMSP52788 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
SMSP52788 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.9■□□□□ 0.78
SMSP52788 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMSP52788 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SMSP52788 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.9■□□□□ 0.78
SMSP52788 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SMSP52788 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMSP52788 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMSP52788 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.9■□□□□ 0.78
SMSP52788 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.9■□□□□ 0.78
SMSP52788 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SMSP52788 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMSP52788 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMSP52788 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
SMSP52788 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.89■□□□□ 0.77
SMSP52788 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SMSP52788 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.89■□□□□ 0.77
SMSP52788 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.89■□□□□ 0.77
SMSP52788 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SMSP52788 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SMSP52788 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.89■□□□□ 0.77
SMSP52788 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.89■□□□□ 0.77
SMSP52788 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
SMSP52788 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SMSP52788 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.88■□□□□ 0.77
SMSP52788 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.88■□□□□ 0.77
SMSP52788 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
SMSP52788 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SMSP52788 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMSP52788 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.88■□□□□ 0.77
SMSP52788 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.88■□□□□ 0.77
SMSP52788 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SMSP52788 MIR6084-201ENST00000622012 110 ntBASIC19.88■□□□□ 0.77
SMSP52788 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
SMSP52788 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMSP52788 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMSP52788 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMSP52788 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMSP52788 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMSP52788 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMSP52788 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
SMSP52788 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SMSP52788 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMSP52788 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMSP52788 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SMSP52788 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.87■□□□□ 0.77
SMSP52788 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMSP52788 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMSP52788 AC010542.4-201ENST00000563151 1910 ntBASIC19.87■□□□□ 0.77
SMSP52788 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.87■□□□□ 0.77
SMSP52788 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.87■□□□□ 0.77
SMSP52788 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SMSP52788 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.87■□□□□ 0.77
SMSP52788 AC092437.1-201ENST00000624794 1048 ntBASIC19.87■□□□□ 0.77
SMSP52788 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMSP52788 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SMSP52788 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMSP52788 FAM99A-202ENST00000538190 1989 ntBASIC19.86■□□□□ 0.77
SMSP52788 AC026310.3-201ENST00000625186 2373 ntBASIC19.86■□□□□ 0.77
SMSP52788 LINC02228-203ENST00000641970 1355 ntBASIC19.86■□□□□ 0.77
SMSP52788 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SMSP52788 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMSP52788 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.86■□□□□ 0.77
SMSP52788 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.86■□□□□ 0.77
SMSP52788 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SMSP52788 CCDC92B-201ENST00000575506 885 ntBASIC19.86■□□□□ 0.77
SMSP52788 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.86■□□□□ 0.77
SMSP52788 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
SMSP52788 NTF6G-201ENST00000591094 616 ntBASIC19.86■□□□□ 0.77
SMSP52788 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SMSP52788 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms