Protein–RNA interactions for Protein: P47708

Rph3a, Rabphilin-3A, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3aP47708 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
Rph3aP47708 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
Rph3aP47708 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rph3aP47708 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Rph3aP47708 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Rph3aP47708 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.08■□□□□ 0.48
Rph3aP47708 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rph3aP47708 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rph3aP47708 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rph3aP47708 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
Rph3aP47708 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rph3aP47708 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
Rph3aP47708 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Rph3aP47708 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rph3aP47708 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rph3aP47708 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Rph3aP47708 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rph3aP47708 Gm38205-201ENSMUST00000192243 258 ntBASIC18.07■□□□□ 0.48
Rph3aP47708 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.07■□□□□ 0.48
Rph3aP47708 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.07■□□□□ 0.48
Rph3aP47708 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.07■□□□□ 0.48
Rph3aP47708 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Rph3aP47708 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rph3aP47708 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.07■□□□□ 0.48
Rph3aP47708 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rph3aP47708 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.07■□□□□ 0.48
Rph3aP47708 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.07■□□□□ 0.48
Rph3aP47708 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rph3aP47708 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
Rph3aP47708 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Rph3aP47708 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.06■□□□□ 0.48
Rph3aP47708 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
Rph3aP47708 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Rph3aP47708 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rph3aP47708 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Rph3aP47708 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rph3aP47708 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Rph3aP47708 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Rph3aP47708 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rph3aP47708 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rph3aP47708 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rph3aP47708 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Rph3aP47708 Reep4-203ENSMUST00000226563 1444 ntBASIC18.06■□□□□ 0.48
Rph3aP47708 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rph3aP47708 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Rph3aP47708 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.05■□□□□ 0.48
Rph3aP47708 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rph3aP47708 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rph3aP47708 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Rph3aP47708 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.05■□□□□ 0.48
Rph3aP47708 Gm42778-201ENSMUST00000199644 553 ntBASIC18.05■□□□□ 0.48
Rph3aP47708 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rph3aP47708 Gm5874-201ENSMUST00000096101 508 ntBASIC18.05■□□□□ 0.48
Rph3aP47708 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rph3aP47708 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Rph3aP47708 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rph3aP47708 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rph3aP47708 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rph3aP47708 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rph3aP47708 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rph3aP47708 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rph3aP47708 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Rph3aP47708 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
Rph3aP47708 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rph3aP47708 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rph3aP47708 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Rph3aP47708 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rph3aP47708 Gm13234-201ENSMUST00000120010 747 ntBASIC18.04■□□□□ 0.48
Rph3aP47708 Gm18284-201ENSMUST00000172604 624 ntBASIC18.04■□□□□ 0.48
Rph3aP47708 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rph3aP47708 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rph3aP47708 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rph3aP47708 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.04■□□□□ 0.48
Rph3aP47708 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Rph3aP47708 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Rph3aP47708 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rph3aP47708 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rph3aP47708 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rph3aP47708 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rph3aP47708 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Rph3aP47708 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rph3aP47708 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rph3aP47708 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rph3aP47708 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rph3aP47708 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.03■□□□□ 0.48
Rph3aP47708 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rph3aP47708 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rph3aP47708 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rph3aP47708 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rph3aP47708 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rph3aP47708 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.03■□□□□ 0.48
Rph3aP47708 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rph3aP47708 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rph3aP47708 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.03■□□□□ 0.48
Rph3aP47708 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rph3aP47708 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rph3aP47708 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rph3aP47708 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Rph3aP47708 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Rph3aP47708 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 90.7 ms