Protein–RNA interactions for Protein: P40343

VPS27, Vacuolar protein sorting-associated protein 27, yeastyeast

Known RBP Predictions only

Length 622 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS27P40343 SMC3YJL074C 3693 nt4.33□□□□□ -1.72
VPS27P40343 LCB5YLR260W 2064 nt4.33□□□□□ -1.72
VPS27P40343 YDR131CYDR131C 1671 nt4.32□□□□□ -1.72
VPS27P40343 RSC1YGR056W 2787 nt4.32□□□□□ -1.72
VPS27P40343 FKH2YNL068C 2589 nt4.32□□□□□ -1.72
VPS27P40343 SUP56tL(CAA)A 82 nt4.32□□□□□ -1.72
VPS27P40343 SUP53tL(CAA)C 82 nt4.32□□□□□ -1.72
VPS27P40343 tL(CAA)DtL(CAA)D 82 nt4.32□□□□□ -1.72
VPS27P40343 tL(CAA)G1tL(CAA)G1 82 nt4.32□□□□□ -1.72
VPS27P40343 SUP54tL(CAA)G2 82 nt4.32□□□□□ -1.72
VPS27P40343 tL(CAA)G3tL(CAA)G3 82 nt4.32□□□□□ -1.72
VPS27P40343 tL(CAA)KtL(CAA)K 82 nt4.32□□□□□ -1.72
VPS27P40343 tL(CAA)LtL(CAA)L 82 nt4.32□□□□□ -1.72
VPS27P40343 tL(CAA)MtL(CAA)M 82 nt4.32□□□□□ -1.72
VPS27P40343 tL(CAA)NtL(CAA)N 82 nt4.32□□□□□ -1.72
VPS27P40343 YGL138CYGL138C 1038 nt4.32□□□□□ -1.72
VPS27P40343 RPL24BYGR148C 468 nt4.32□□□□□ -1.72
VPS27P40343 YIR014WYIR014W 729 nt4.32□□□□□ -1.72
VPS27P40343 YJR112W-AYJR112W-A 330 nt4.32□□□□□ -1.72
VPS27P40343 RPL22AYLR061W 366 nt4.32□□□□□ -1.72
VPS27P40343 CSM3YMR048W 954 nt4.32□□□□□ -1.72
VPS27P40343 SAM37YMR060C 984 nt4.32□□□□□ -1.72
VPS27P40343 RFC3YNL290W 1023 nt4.32□□□□□ -1.72
VPS27P40343 IPP1YBR011C 864 nt4.32□□□□□ -1.72
VPS27P40343 YPR078CYPR078C 1119 nt4.32□□□□□ -1.72
VPS27P40343 NUP60YAR002W 1620 nt4.32□□□□□ -1.72
VPS27P40343 YPL109CYPL109C 1974 nt4.31□□□□□ -1.72
VPS27P40343 DET1YDR051C 1005 nt4.31□□□□□ -1.72
VPS27P40343 IRC18YJL037W 675 nt4.31□□□□□ -1.72
VPS27P40343 IES3YLR052W 753 nt4.31□□□□□ -1.72
VPS27P40343 YOL106WYOL106W 354 nt4.31□□□□□ -1.72
VPS27P40343 YPL088WYPL088W 1029 nt4.31□□□□□ -1.72
VPS27P40343 SST2YLR452C 2097 nt4.31□□□□□ -1.72
VPS27P40343 YOR365CYOR365C 2112 nt4.3□□□□□ -1.72
VPS27P40343 COM2YER130C 1332 nt4.3□□□□□ -1.72
VPS27P40343 YJR061WYJR061W 2808 nt4.3□□□□□ -1.72
VPS27P40343 TSC13YDL015C 933 nt4.3□□□□□ -1.72
VPS27P40343 CBS2YDR197W 1170 nt4.3□□□□□ -1.72
VPS27P40343 BCD1YHR040W 1101 nt4.3□□□□□ -1.72
VPS27P40343 MET14YKL001C 609 nt4.3□□□□□ -1.72
VPS27P40343 FMP41YNL168C 780 nt4.3□□□□□ -1.72
VPS27P40343 YNL320WYNL320W 855 nt4.3□□□□□ -1.72
VPS27P40343 PIN3YPR154W 648 nt4.3□□□□□ -1.72
VPS27P40343 YLR177WYLR177W 1887 nt4.3□□□□□ -1.72
VPS27P40343 HDA2YDR295C 2025 nt4.29□□□□□ -1.72
VPS27P40343 VMA7YGR020C 357 nt4.29□□□□□ -1.72
VPS27P40343 GCD14YJL125C 1152 nt4.29□□□□□ -1.72
VPS27P40343 ECM4YKR076W 1113 nt4.29□□□□□ -1.72
VPS27P40343 ERP1YAR002C-A 660 nt4.29□□□□□ -1.72
VPS27P40343 YPR136CYPR136C 513 nt4.29□□□□□ -1.72
VPS27P40343 URA2YJL130C 6645 nt4.29□□□□□ -1.72
VPS27P40343 SPA2YLL021W 4401 nt4.28□□□□□ -1.72
VPS27P40343 MYO3YKL129C 3819 nt4.28□□□□□ -1.72
VPS27P40343 TLG1YDR468C 675 nt4.28□□□□□ -1.72
VPS27P40343 YFR057WYFR057W 456 nt4.28□□□□□ -1.72
VPS27P40343 CAP2YIL034C 864 nt4.28□□□□□ -1.72
VPS27P40343 TPM1YNL079C 600 nt4.28□□□□□ -1.72
VPS27P40343 MER1YNL210W 813 nt4.28□□□□□ -1.72
VPS27P40343 LDS2YOL047C 1071 nt4.28□□□□□ -1.72
VPS27P40343 YPR027CYPR027C 834 nt4.28□□□□□ -1.72
VPS27P40343 YTA7YGR270W 4140 nt4.27□□□□□ -1.73
VPS27P40343 SPT14YPL175W 1359 nt4.27□□□□□ -1.73
VPS27P40343 BI3Q0115 1554 nt4.27□□□□□ -1.73
VPS27P40343 ACK1YDL203C 1872 nt4.27□□□□□ -1.73
VPS27P40343 YEL032C-AYEL032C-A 162 nt4.27□□□□□ -1.73
VPS27P40343 LSM4YER112W 564 nt4.27□□□□□ -1.73
VPS27P40343 YGL041W-AYGL041W-A 465 nt4.27□□□□□ -1.73
VPS27P40343 YGL204CYGL204C 306 nt4.27□□□□□ -1.73
VPS27P40343 YVH1YIR026C 1095 nt4.27□□□□□ -1.73
VPS27P40343 YBL029C-AYBL029C-A 285 nt4.27□□□□□ -1.73
VPS27P40343 YOR082CYOR082C 342 nt4.27□□□□□ -1.73
VPS27P40343 SHQ1YIL104C 1524 nt4.26□□□□□ -1.73
VPS27P40343 DSS1YMR287C 2910 nt4.26□□□□□ -1.73
VPS27P40343 PKH1YDR490C 2301 nt4.26□□□□□ -1.73
VPS27P40343 UBC9YDL064W 474 nt4.26□□□□□ -1.73
VPS27P40343 QRI7YDL104C 1224 nt4.26□□□□□ -1.73
VPS27P40343 FAP7YDL166C 594 nt4.26□□□□□ -1.73
VPS27P40343 YGL230CYGL230C 444 nt4.26□□□□□ -1.73
VPS27P40343 YAL034C-BYAL034C-B 354 nt4.26□□□□□ -1.73
VPS27P40343 AIM26YKL037W 357 nt4.26□□□□□ -1.73
VPS27P40343 RAD14YMR201C 1116 nt4.26□□□□□ -1.73
VPS27P40343 END3YNL084C 1050 nt4.26□□□□□ -1.73
VPS27P40343 RPS10AYOR293W 318 nt4.26□□□□□ -1.73
VPS27P40343 SIN4YNL236W 2925 nt4.26□□□□□ -1.73
VPS27P40343 BCS1YDR375C 1371 nt4.26□□□□□ -1.73
VPS27P40343 ARG5,6YER069W 2592 nt4.25□□□□□ -1.73
VPS27P40343 RPS29BYDL061C 171 nt4.25□□□□□ -1.73
VPS27P40343 YDR149CYDR149C 708 nt4.25□□□□□ -1.73
VPS27P40343 YGR190CYGR190C 366 nt4.25□□□□□ -1.73
VPS27P40343 RSM27YGR215W 333 nt4.25□□□□□ -1.73
VPS27P40343 CPA2YJR109C 3357 nt4.25□□□□□ -1.73
VPS27P40343 BUR2YLR226W 1188 nt4.25□□□□□ -1.73
VPS27P40343 TRI1YMR233W 681 nt4.25□□□□□ -1.73
VPS27P40343 YMR310CYMR310C 954 nt4.25□□□□□ -1.73
VPS27P40343 RAD4YER162C 2265 nt4.25□□□□□ -1.73
VPS27P40343 AEP2YMR282C 1743 nt4.24□□□□□ -1.73
VPS27P40343 STU2YLR045C 2667 nt4.24□□□□□ -1.73
VPS27P40343 BSC1YDL037C 987 nt4.24□□□□□ -1.73
VPS27P40343 TDA10YGR205W 873 nt4.24□□□□□ -1.73
VPS27P40343 SFH1YLR321C 1281 nt4.24□□□□□ -1.73
Retrieved 100 of 7,029 protein–RNA pairs in 47.6 ms