Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PCK1P35558 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCK1P35558 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCK1P35558 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCK1P35558 AC099791.1-201ENST00000416440 715 ntBASIC22.42■■□□□ 1.18
PCK1P35558 AP001330.3-201ENST00000520123 633 ntBASIC22.42■■□□□ 1.18
PCK1P35558 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC22.42■■□□□ 1.18
PCK1P35558 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC22.42■■□□□ 1.18
PCK1P35558 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC22.42■■□□□ 1.18
PCK1P35558 AL355001.2-201ENST00000620617 1191 ntBASIC22.42■■□□□ 1.18
PCK1P35558 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCK1P35558 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
PCK1P35558 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PCK1P35558 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PCK1P35558 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PCK1P35558 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
PCK1P35558 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC22.41■■□□□ 1.18
PCK1P35558 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC22.41■■□□□ 1.18
PCK1P35558 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCK1P35558 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCK1P35558 NALT1-201ENST00000429224 738 ntTSL 5 BASIC22.41■■□□□ 1.18
PCK1P35558 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC22.41■■□□□ 1.18
PCK1P35558 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCK1P35558 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
PCK1P35558 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC22.41■■□□□ 1.18
PCK1P35558 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
PCK1P35558 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
PCK1P35558 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC22.4■■□□□ 1.18
PCK1P35558 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCK1P35558 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC22.4■■□□□ 1.18
PCK1P35558 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCK1P35558 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCK1P35558 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC22.4■■□□□ 1.18
PCK1P35558 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC22.4■■□□□ 1.18
PCK1P35558 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC22.4■■□□□ 1.18
PCK1P35558 AL031432.3-201ENST00000607698 485 ntBASIC22.4■■□□□ 1.18
PCK1P35558 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCK1P35558 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
PCK1P35558 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
PCK1P35558 MIR939-201ENST00000401314 82 ntBASIC22.39■■□□□ 1.17
PCK1P35558 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
PCK1P35558 SMUG1P1-201ENST00000590640 811 ntBASIC22.39■■□□□ 1.17
PCK1P35558 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PCK1P35558 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC22.39■■□□□ 1.17
PCK1P35558 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC22.39■■□□□ 1.17
PCK1P35558 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC22.39■■□□□ 1.17
PCK1P35558 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC22.39■■□□□ 1.17
PCK1P35558 AP004607.7-201ENST00000527152 1677 ntBASIC22.39■■□□□ 1.17
PCK1P35558 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC22.39■■□□□ 1.17
PCK1P35558 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCK1P35558 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC22.38■■□□□ 1.17
PCK1P35558 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC22.38■■□□□ 1.17
PCK1P35558 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PCK1P35558 AL139246.5-201ENST00000606645 996 ntBASIC22.38■■□□□ 1.17
PCK1P35558 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC22.38■■□□□ 1.17
PCK1P35558 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCK1P35558 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCK1P35558 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC22.38■■□□□ 1.17
PCK1P35558 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCK1P35558 RASA4CP-201ENST00000424092 1398 ntBASIC22.38■■□□□ 1.17
PCK1P35558 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
PCK1P35558 AC026471.6-201ENST00000622954 1905 ntBASIC22.37■■□□□ 1.17
PCK1P35558 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCK1P35558 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PCK1P35558 AC244015.2-201ENST00000616358 1861 ntBASIC22.37■■□□□ 1.17
PCK1P35558 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC22.37■■□□□ 1.17
PCK1P35558 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCK1P35558 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
PCK1P35558 MAG-206ENST00000597035 542 ntTSL 4 BASIC22.37■■□□□ 1.17
PCK1P35558 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCK1P35558 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCK1P35558 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCK1P35558 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCK1P35558 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC22.36■■□□□ 1.17
PCK1P35558 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCK1P35558 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
PCK1P35558 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCK1P35558 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PCK1P35558 AC091305.1-201ENST00000479476 895 ntBASIC22.36■■□□□ 1.17
PCK1P35558 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC22.36■■□□□ 1.17
PCK1P35558 AF213884.3-201ENST00000563833 479 ntBASIC22.36■■□□□ 1.17
PCK1P35558 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
PCK1P35558 AL136967.2-201ENST00000623968 743 ntBASIC22.36■■□□□ 1.17
PCK1P35558 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
PCK1P35558 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PCK1P35558 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PCK1P35558 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCK1P35558 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PCK1P35558 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC22.36■■□□□ 1.17
PCK1P35558 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCK1P35558 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC22.36■■□□□ 1.17
PCK1P35558 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PCK1P35558 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC22.35■■□□□ 1.17
PCK1P35558 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCK1P35558 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC22.35■■□□□ 1.17
PCK1P35558 GRAMD4P2-201ENST00000423297 1097 ntBASIC22.35■■□□□ 1.17
PCK1P35558 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC22.35■■□□□ 1.17
PCK1P35558 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC22.35■■□□□ 1.17
PCK1P35558 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC22.35■■□□□ 1.17
PCK1P35558 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC22.35■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms