Protein–RNA interactions for Protein: P32588

PUB1, Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1, yeastyeast

Known RBP RIP-Chip data

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUB1P32588 YBR230W-AYBR230W-A 201 nt4.71□□□□□ -1.66
PUB1P32588 snR54snR54 86 nt4.71□□□□□ -1.66
PUB1P32588 ECM3YOR092W 1842 nt4.71□□□□□ -1.66 RIP-Chip
PUB1P32588 MGS1YNL218W 1764 nt4.7□□□□□ -1.66
PUB1P32588 JEM1YJL073W 1938 nt4.7□□□□□ -1.66
PUB1P32588 FAT3YKL187C 2253 nt4.7□□□□□ -1.66 RIP-Chip
PUB1P32588 UTR4YEL038W 684 nt4.7□□□□□ -1.66 RIP-Chip
PUB1P32588 RGI1YER067W 486 nt4.7□□□□□ -1.66
PUB1P32588 SOH1YGL127C 384 nt4.7□□□□□ -1.66 RIP-Chip
PUB1P32588 YJR128WYJR128W 360 nt4.7□□□□□ -1.66
PUB1P32588 BLI1YKL061W 342 nt4.7□□□□□ -1.66
PUB1P32588 YOL097W-AYOL097W-A 186 nt4.7□□□□□ -1.66
PUB1P32588 YGK3YOL128C 1128 nt4.7□□□□□ -1.66 RIP-Chip
PUB1P32588 GRX7YBR014C 612 nt4.7□□□□□ -1.66
PUB1P32588 ATG1YGL180W 2694 nt4.7□□□□□ -1.66 RIP-Chip
PUB1P32588 MCH4YOL119C 1506 nt4.7□□□□□ -1.66 RIP-Chip
PUB1P32588 TKL1YPR074C 2043 nt4.7□□□□□ -1.66
PUB1P32588 YPR148CYPR148C 1308 nt4.7□□□□□ -1.66
PUB1P32588 CBP1YJL209W 1965 nt4.69□□□□□ -1.66
PUB1P32588 YPL109CYPL109C 1974 nt4.69□□□□□ -1.66
PUB1P32588 NGL2YMR285C 1548 nt4.69□□□□□ -1.66
PUB1P32588 ARP2YDL029W 1176 nt4.69□□□□□ -1.66
PUB1P32588 AAD4YDL243C 990 nt4.69□□□□□ -1.66
PUB1P32588 YRB1YDR002W 606 nt4.69□□□□□ -1.66
PUB1P32588 YEL077W-AYEL077W-A 483 nt4.69□□□□□ -1.66
PUB1P32588 SLO1YER180C-A 258 nt4.69□□□□□ -1.66 RIP-Chip
PUB1P32588 YER190C-BYER190C-B 483 nt4.69□□□□□ -1.66
PUB1P32588 YFL068WYFL068W 483 nt4.69□□□□□ -1.66
PUB1P32588 ZRT1YGL255W 1131 nt4.69□□□□□ -1.66
PUB1P32588 YGR228WYGR228W 345 nt4.69□□□□□ -1.66
PUB1P32588 YGR296C-BYGR296C-B 483 nt4.69□□□□□ -1.66
PUB1P32588 YHL050W-AYHL050W-A 483 nt4.69□□□□□ -1.66
PUB1P32588 YHR052W-AYHR052W-A 195 nt4.69□□□□□ -1.66
PUB1P32588 YHR054W-AYHR054W-A 195 nt4.69□□□□□ -1.66
PUB1P32588 YHR219C-AYHR219C-A 483 nt4.69□□□□□ -1.66
PUB1P32588 YIL156W-AYIL156W-A 402 nt4.69□□□□□ -1.66
PUB1P32588 YLL066W-AYLL066W-A 483 nt4.69□□□□□ -1.66
PUB1P32588 YLL067W-AYLL067W-A 483 nt4.69□□□□□ -1.66
PUB1P32588 YLR466C-AYLR466C-A 483 nt4.69□□□□□ -1.66
PUB1P32588 YLR467C-AYLR467C-A 483 nt4.69□□□□□ -1.66
PUB1P32588 YML133W-BYML133W-B 483 nt4.69□□□□□ -1.66
PUB1P32588 MCM1YMR043W 861 nt4.69□□□□□ -1.66 RIP-Chip
PUB1P32588 YNL339W-BYNL339W-B 483 nt4.69□□□□□ -1.66
PUB1P32588 YBL113W-AYBL113W-A 483 nt4.69□□□□□ -1.66
PUB1P32588 YOR396C-AYOR396C-A 483 nt4.69□□□□□ -1.66
PUB1P32588 YPL119C-AYPL119C-A 264 nt4.69□□□□□ -1.66
PUB1P32588 YPL283W-BYPL283W-B 483 nt4.69□□□□□ -1.66
PUB1P32588 YPR204C-AYPR204C-A 483 nt4.69□□□□□ -1.66
PUB1P32588 YBR126W-AYBR126W-A 207 nt4.69□□□□□ -1.66
PUB1P32588 ARB1YER036C 1833 nt4.69□□□□□ -1.66
PUB1P32588 TDA3YHR009C 1572 nt4.69□□□□□ -1.66 RIP-Chip
PUB1P32588 SED4YCR067C 3198 nt4.69□□□□□ -1.66
PUB1P32588 YDR417CYDR417C 372 nt4.68□□□□□ -1.66
PUB1P32588 FAR7YFR008W 666 nt4.68□□□□□ -1.66
PUB1P32588 OTU2YHL013C 924 nt4.68□□□□□ -1.66
PUB1P32588 GLO1YML004C 981 nt4.68□□□□□ -1.66 RIP-Chip
PUB1P32588 YBL055CYBL055C 1257 nt4.68□□□□□ -1.66
PUB1P32588 snR10snR10 245 nt4.68□□□□□ -1.66
PUB1P32588 RPL21BYPL079W 483 nt4.68□□□□□ -1.66
PUB1P32588 CBC2YPL178W 627 nt4.68□□□□□ -1.66 RIP-Chip
PUB1P32588 SPN1YPR133C 1233 nt4.68□□□□□ -1.66
PUB1P32588 PLM2YDR501W 1566 nt4.68□□□□□ -1.66
PUB1P32588 GRS1YBR121C 2004 nt4.68□□□□□ -1.66
PUB1P32588 NOT3YIL038C 2511 nt4.68□□□□□ -1.66
PUB1P32588 MRH4YGL064C 1686 nt4.67□□□□□ -1.66
PUB1P32588 SDS23YGL056C 1584 nt4.67□□□□□ -1.66 RIP-Chip
PUB1P32588 YCL068CYCL068C 783 nt4.67□□□□□ -1.66
PUB1P32588 YCR101CYCR101C 549 nt4.67□□□□□ -1.66
PUB1P32588 YER085CYER085C 522 nt4.67□□□□□ -1.66
PUB1P32588 RMR1YGL250W 726 nt4.67□□□□□ -1.66
PUB1P32588 YGR035CYGR035C 351 nt4.67□□□□□ -1.66
PUB1P32588 YGR176WYGR176W 348 nt4.67□□□□□ -1.66
PUB1P32588 YHL049CYHL049C 816 nt4.67□□□□□ -1.66
PUB1P32588 OAR1YKL055C 837 nt4.67□□□□□ -1.66 RIP-Chip
PUB1P32588 MRPL20YKR085C 588 nt4.67□□□□□ -1.66
PUB1P32588 PDP3YLR455W 915 nt4.67□□□□□ -1.66 RIP-Chip
PUB1P32588 FLC3YGL139W 2409 nt4.66□□□□□ -1.66 RIP-Chip
PUB1P32588 YDL109CYDL109C 1944 nt4.66□□□□□ -1.66
PUB1P32588 YPD1YDL235C 504 nt4.66□□□□□ -1.66
PUB1P32588 RPA14YDR156W 414 nt4.66□□□□□ -1.66
PUB1P32588 YER175W-AYER175W-A 165 nt4.66□□□□□ -1.66
PUB1P32588 YPT32YGL210W 669 nt4.66□□□□□ -1.66
PUB1P32588 RTS3YGR161C 792 nt4.66□□□□□ -1.66
PUB1P32588 YHI9YHR029C 885 nt4.66□□□□□ -1.66
PUB1P32588 YIL020C-AYIL020C-A 339 nt4.66□□□□□ -1.66
PUB1P32588 YIL046W-AYIL046W-A 165 nt4.66□□□□□ -1.66
PUB1P32588 YRA2YKL214C 612 nt4.66□□□□□ -1.66 RIP-Chip
PUB1P32588 YML108WYML108W 318 nt4.66□□□□□ -1.66
PUB1P32588 snR24snR24 89 nt4.66□□□□□ -1.66
PUB1P32588 AIM4YBR194W 372 nt4.66□□□□□ -1.66 RIP-Chip
PUB1P32588 CTP1YBR291C 900 nt4.66□□□□□ -1.66
PUB1P32588 TEA1YOR337W 2280 nt4.66□□□□□ -1.66
PUB1P32588 SKO1YNL167C 1944 nt4.66□□□□□ -1.66 RIP-Chip
PUB1P32588 CTK1YKL139W 1587 nt4.65□□□□□ -1.66
PUB1P32588 HXT14YNL318C 1623 nt4.65□□□□□ -1.66
PUB1P32588 UGA1YGR019W 1416 nt4.65□□□□□ -1.66 RIP-Chip
PUB1P32588 SRP101YDR292C 1866 nt4.65□□□□□ -1.66
PUB1P32588 RRN3YKL125W 1884 nt4.65□□□□□ -1.66
PUB1P32588 DBF4YDR052C 2115 nt4.65□□□□□ -1.67
PUB1P32588 CRG1YHR209W 876 nt4.65□□□□□ -1.67
Retrieved 100 of 7,029 protein–RNA pairs in 28.1 ms