Protein–RNA interactions for Protein: O88338

Cdh16, Cadherin-16, mousemouse

Predictions only

Length 830 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh16O88338 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdh16O88338 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdh16O88338 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdh16O88338 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdh16O88338 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.42■□□□□ 0.54
Cdh16O88338 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdh16O88338 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdh16O88338 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdh16O88338 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdh16O88338 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdh16O88338 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdh16O88338 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdh16O88338 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Cdh16O88338 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.41■□□□□ 0.54
Cdh16O88338 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.41■□□□□ 0.54
Cdh16O88338 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Cdh16O88338 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdh16O88338 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Cdh16O88338 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdh16O88338 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdh16O88338 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdh16O88338 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cdh16O88338 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdh16O88338 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
Cdh16O88338 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdh16O88338 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cdh16O88338 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdh16O88338 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.4■□□□□ 0.54
Cdh16O88338 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdh16O88338 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.4■□□□□ 0.54
Cdh16O88338 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdh16O88338 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdh16O88338 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdh16O88338 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cdh16O88338 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdh16O88338 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Cdh16O88338 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdh16O88338 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Cdh16O88338 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.53
Cdh16O88338 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdh16O88338 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.39■□□□□ 0.53
Cdh16O88338 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.39■□□□□ 0.53
Cdh16O88338 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.39■□□□□ 0.53
Cdh16O88338 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.39■□□□□ 0.53
Cdh16O88338 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdh16O88338 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Cdh16O88338 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.39■□□□□ 0.53
Cdh16O88338 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Cdh16O88338 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cdh16O88338 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdh16O88338 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
Cdh16O88338 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdh16O88338 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.38■□□□□ 0.53
Cdh16O88338 Gm43530-201ENSMUST00000195920 274 ntBASIC18.38■□□□□ 0.53
Cdh16O88338 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdh16O88338 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdh16O88338 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdh16O88338 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Cdh16O88338 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdh16O88338 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
Cdh16O88338 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdh16O88338 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.37■□□□□ 0.53
Cdh16O88338 Gm22238-201ENSMUST00000175222 88 ntBASIC18.37■□□□□ 0.53
Cdh16O88338 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Cdh16O88338 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdh16O88338 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Cdh16O88338 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdh16O88338 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdh16O88338 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdh16O88338 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdh16O88338 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdh16O88338 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdh16O88338 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Cdh16O88338 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
Cdh16O88338 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdh16O88338 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdh16O88338 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cdh16O88338 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdh16O88338 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cdh16O88338 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cdh16O88338 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cdh16O88338 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.36■□□□□ 0.53
Cdh16O88338 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.36■□□□□ 0.53
Cdh16O88338 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdh16O88338 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdh16O88338 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdh16O88338 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdh16O88338 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cdh16O88338 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdh16O88338 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.35■□□□□ 0.53
Cdh16O88338 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdh16O88338 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cdh16O88338 Gm45102-201ENSMUST00000207427 857 ntBASIC18.35■□□□□ 0.53
Cdh16O88338 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
Cdh16O88338 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdh16O88338 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Cdh16O88338 AA386476-201ENSMUST00000098781 1665 ntBASIC18.34■□□□□ 0.53
Cdh16O88338 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdh16O88338 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdh16O88338 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms