Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 AC080038.3-201ENST00000623346 1952 ntBASIC29.66■■■□□ 2.34
BRD4O60885 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC29.66■■■□□ 2.34
BRD4O60885 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC29.65■■■□□ 2.34
BRD4O60885 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
BRD4O60885 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
BRD4O60885 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC29.65■■■□□ 2.34
BRD4O60885 DUX4L16-201ENST00000555130 1264 ntBASIC29.65■■■□□ 2.34
BRD4O60885 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC29.65■■■□□ 2.34
BRD4O60885 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC29.65■■■□□ 2.34
BRD4O60885 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
BRD4O60885 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC29.65■■■□□ 2.34
BRD4O60885 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC29.65■■■□□ 2.34
BRD4O60885 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC29.65■■■□□ 2.34
BRD4O60885 MFF-207ENST00000409565 1548 ntTSL 2 BASIC29.65■■■□□ 2.34
BRD4O60885 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC29.64■■■□□ 2.34
BRD4O60885 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC29.64■■■□□ 2.34
BRD4O60885 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
BRD4O60885 EP400NL-214ENST00000641289 2402 ntBASIC29.64■■■□□ 2.34
BRD4O60885 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC29.64■■■□□ 2.34
BRD4O60885 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
BRD4O60885 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC29.64■■■□□ 2.34
BRD4O60885 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
BRD4O60885 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC29.64■■■□□ 2.34
BRD4O60885 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
BRD4O60885 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC29.64■■■□□ 2.33
BRD4O60885 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC29.64■■■□□ 2.33
BRD4O60885 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC29.64■■■□□ 2.33
BRD4O60885 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC29.64■■■□□ 2.33
BRD4O60885 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC29.64■■■□□ 2.33
BRD4O60885 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC29.64■■■□□ 2.33
BRD4O60885 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC29.64■■■□□ 2.33
BRD4O60885 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC29.64■■■□□ 2.33
BRD4O60885 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
BRD4O60885 AC055733.4-201ENST00000638462 1354 ntBASIC29.63■■■□□ 2.33
BRD4O60885 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC29.63■■■□□ 2.33
BRD4O60885 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC29.63■■■□□ 2.33
BRD4O60885 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC29.63■■■□□ 2.33
BRD4O60885 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC29.63■■■□□ 2.33
BRD4O60885 AL121832.2-201ENST00000610979 668 ntBASIC29.63■■■□□ 2.33
BRD4O60885 GAMT-205ENST00000640762 751 ntTSL 5 BASIC29.63■■■□□ 2.33
BRD4O60885 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC29.63■■■□□ 2.33
BRD4O60885 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC29.63■■■□□ 2.33
BRD4O60885 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC29.62■■■□□ 2.33
BRD4O60885 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
BRD4O60885 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
BRD4O60885 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
BRD4O60885 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC29.62■■■□□ 2.33
BRD4O60885 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC29.62■■■□□ 2.33
BRD4O60885 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC29.62■■■□□ 2.33
BRD4O60885 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
BRD4O60885 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC29.61■■■□□ 2.33
BRD4O60885 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC29.61■■■□□ 2.33
BRD4O60885 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC29.61■■■□□ 2.33
BRD4O60885 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
BRD4O60885 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
BRD4O60885 GUSBP6-202ENST00000438529 1198 ntBASIC29.61■■■□□ 2.33
BRD4O60885 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC29.61■■■□□ 2.33
BRD4O60885 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC29.61■■■□□ 2.33
BRD4O60885 SLC7A5P2-201ENST00000553010 536 ntBASIC29.61■■■□□ 2.33
BRD4O60885 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC29.61■■■□□ 2.33
BRD4O60885 UBE2DNL-204ENST00000602536 740 ntBASIC29.61■■■□□ 2.33
BRD4O60885 MYCNOS-205ENST00000641950 531 ntBASIC29.61■■■□□ 2.33
BRD4O60885 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
BRD4O60885 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
BRD4O60885 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
BRD4O60885 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
BRD4O60885 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
BRD4O60885 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
BRD4O60885 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC29.6■■■□□ 2.33
BRD4O60885 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC29.6■■■□□ 2.33
BRD4O60885 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC29.6■■■□□ 2.33
BRD4O60885 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC29.6■■■□□ 2.33
BRD4O60885 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC29.6■■■□□ 2.33
BRD4O60885 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
BRD4O60885 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC29.6■■■□□ 2.33
BRD4O60885 PARP1-210ENST00000629232 477 ntTSL 5 BASIC29.6■■■□□ 2.33
BRD4O60885 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC29.6■■■□□ 2.33
BRD4O60885 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC29.6■■■□□ 2.33
BRD4O60885 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
BRD4O60885 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
BRD4O60885 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
BRD4O60885 AC137767.1-201ENST00000602918 1920 ntBASIC29.59■■■□□ 2.33
BRD4O60885 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC29.59■■■□□ 2.33
BRD4O60885 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC29.59■■■□□ 2.33
BRD4O60885 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC29.59■■■□□ 2.33
BRD4O60885 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC29.59■■■□□ 2.33
BRD4O60885 WT1-AS_3.1-201ENST00000613262 234 ntBASIC29.59■■■□□ 2.33
BRD4O60885 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC29.59■■■□□ 2.33
BRD4O60885 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
BRD4O60885 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC29.59■■■□□ 2.33
BRD4O60885 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC29.58■■■□□ 2.33
BRD4O60885 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
BRD4O60885 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC29.58■■■□□ 2.33
BRD4O60885 PARP1-202ENST00000366792 553 ntTSL 3 BASIC29.58■■■□□ 2.33
BRD4O60885 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC29.58■■■□□ 2.33
BRD4O60885 TSPY6P-201ENST00000448518 926 ntBASIC29.58■■■□□ 2.33
BRD4O60885 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC29.58■■■□□ 2.33
BRD4O60885 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC29.58■■■□□ 2.33
BRD4O60885 MAZ-216ENST00000616501 991 ntTSL 5 BASIC29.58■■■□□ 2.33
BRD4O60885 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms