Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
NPHS1O60500 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.8■□□□□ 0.92
NPHS1O60500 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NPHS1O60500 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
NPHS1O60500 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NPHS1O60500 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NPHS1O60500 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NPHS1O60500 SRD5A1P1-201ENST00000442297 786 ntBASIC20.8■□□□□ 0.92
NPHS1O60500 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.8■□□□□ 0.92
NPHS1O60500 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NPHS1O60500 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.8■□□□□ 0.92
NPHS1O60500 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
NPHS1O60500 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NPHS1O60500 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NPHS1O60500 AC073130.3-201ENST00000624389 2278 ntBASIC20.8■□□□□ 0.92
NPHS1O60500 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
NPHS1O60500 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NPHS1O60500 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NPHS1O60500 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
NPHS1O60500 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NPHS1O60500 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NPHS1O60500 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NPHS1O60500 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.79■□□□□ 0.92
NPHS1O60500 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
NPHS1O60500 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
NPHS1O60500 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.79■□□□□ 0.92
NPHS1O60500 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
NPHS1O60500 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
NPHS1O60500 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
NPHS1O60500 AL049796.1-201ENST00000565336 1766 ntBASIC20.79■□□□□ 0.92
NPHS1O60500 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
NPHS1O60500 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.79■□□□□ 0.92
NPHS1O60500 LINC01521-201ENST00000504184 1943 ntBASIC20.78■□□□□ 0.92
NPHS1O60500 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.78■□□□□ 0.92
NPHS1O60500 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NPHS1O60500 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
NPHS1O60500 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NPHS1O60500 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NPHS1O60500 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NPHS1O60500 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
NPHS1O60500 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NPHS1O60500 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NPHS1O60500 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NPHS1O60500 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.78■□□□□ 0.92
NPHS1O60500 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.78■□□□□ 0.92
NPHS1O60500 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
NPHS1O60500 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NPHS1O60500 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NPHS1O60500 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NPHS1O60500 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NPHS1O60500 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.78■□□□□ 0.92
NPHS1O60500 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
NPHS1O60500 AC003102.1-202ENST00000563394 1796 ntBASIC20.77■□□□□ 0.92
NPHS1O60500 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.77■□□□□ 0.92
NPHS1O60500 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.77■□□□□ 0.92
NPHS1O60500 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.77■□□□□ 0.92
NPHS1O60500 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
NPHS1O60500 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.77■□□□□ 0.92
NPHS1O60500 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
NPHS1O60500 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.77■□□□□ 0.92
NPHS1O60500 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.77■□□□□ 0.92
NPHS1O60500 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NPHS1O60500 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
NPHS1O60500 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
NPHS1O60500 AP004607.7-201ENST00000527152 1677 ntBASIC20.77■□□□□ 0.91
NPHS1O60500 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NPHS1O60500 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NPHS1O60500 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NPHS1O60500 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.76■□□□□ 0.91
NPHS1O60500 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
NPHS1O60500 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NPHS1O60500 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NPHS1O60500 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NPHS1O60500 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NPHS1O60500 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NPHS1O60500 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
NPHS1O60500 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NPHS1O60500 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
NPHS1O60500 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NPHS1O60500 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
NPHS1O60500 AL157384.1-201ENST00000445995 2473 ntBASIC20.75■□□□□ 0.91
NPHS1O60500 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
NPHS1O60500 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NPHS1O60500 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
NPHS1O60500 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.75■□□□□ 0.91
NPHS1O60500 AL512631.2-201ENST00000604634 923 ntBASIC20.75■□□□□ 0.91
NPHS1O60500 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.75■□□□□ 0.91
NPHS1O60500 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NPHS1O60500 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NPHS1O60500 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NPHS1O60500 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NPHS1O60500 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NPHS1O60500 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NPHS1O60500 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
NPHS1O60500 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NPHS1O60500 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NPHS1O60500 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
NPHS1O60500 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.74■□□□□ 0.91
NPHS1O60500 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.74■□□□□ 0.91
NPHS1O60500 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms