Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC28A2O43868 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.51■□□□□ 0.87
SLC28A2O43868 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC28A2O43868 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SLC28A2O43868 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SLC28A2O43868 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC28A2O43868 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC28A2O43868 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
SLC28A2O43868 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC28A2O43868 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
SLC28A2O43868 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.5■□□□□ 0.87
SLC28A2O43868 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC28A2O43868 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
SLC28A2O43868 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC28A2O43868 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SLC28A2O43868 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC28A2O43868 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.5■□□□□ 0.87
SLC28A2O43868 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SLC28A2O43868 AC092053.2-201ENST00000640557 1818 ntBASIC20.5■□□□□ 0.87
SLC28A2O43868 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC28A2O43868 LINC01960-201ENST00000563759 1884 ntBASIC20.5■□□□□ 0.87
SLC28A2O43868 AC004687.1-201ENST00000579003 1625 ntBASIC20.49■□□□□ 0.87
SLC28A2O43868 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.49■□□□□ 0.87
SLC28A2O43868 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC28A2O43868 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC28A2O43868 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC28A2O43868 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.49■□□□□ 0.87
SLC28A2O43868 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
SLC28A2O43868 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.49■□□□□ 0.87
SLC28A2O43868 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.49■□□□□ 0.87
SLC28A2O43868 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.49■□□□□ 0.87
SLC28A2O43868 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC28A2O43868 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.49■□□□□ 0.87
SLC28A2O43868 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
SLC28A2O43868 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.49■□□□□ 0.87
SLC28A2O43868 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC28A2O43868 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
SLC28A2O43868 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.48■□□□□ 0.87
SLC28A2O43868 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SLC28A2O43868 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC28A2O43868 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SLC28A2O43868 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.48■□□□□ 0.87
SLC28A2O43868 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC28A2O43868 GPX1P1-201ENST00000388829 606 ntBASIC20.48■□□□□ 0.87
SLC28A2O43868 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.48■□□□□ 0.87
SLC28A2O43868 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.48■□□□□ 0.87
SLC28A2O43868 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.48■□□□□ 0.87
SLC28A2O43868 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.48■□□□□ 0.87
SLC28A2O43868 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SLC28A2O43868 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.48■□□□□ 0.87
SLC28A2O43868 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC28A2O43868 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
SLC28A2O43868 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.48■□□□□ 0.87
SLC28A2O43868 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC28A2O43868 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC28A2O43868 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SLC28A2O43868 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
SLC28A2O43868 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC28A2O43868 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
SLC28A2O43868 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SLC28A2O43868 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC28A2O43868 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.47■□□□□ 0.87
SLC28A2O43868 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
SLC28A2O43868 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SLC28A2O43868 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC28A2O43868 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SLC28A2O43868 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC28A2O43868 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC28A2O43868 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.47■□□□□ 0.87
SLC28A2O43868 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.47■□□□□ 0.87
SLC28A2O43868 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.47■□□□□ 0.87
SLC28A2O43868 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC28A2O43868 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
SLC28A2O43868 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SLC28A2O43868 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
SLC28A2O43868 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
SLC28A2O43868 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC28A2O43868 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
SLC28A2O43868 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC28A2O43868 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.46■□□□□ 0.87
SLC28A2O43868 MIR663A-201ENST00000385250 93 ntBASIC20.46■□□□□ 0.87
SLC28A2O43868 AP005435.1-201ENST00000529293 1178 ntBASIC20.46■□□□□ 0.87
SLC28A2O43868 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.46■□□□□ 0.87
SLC28A2O43868 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
SLC28A2O43868 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC28A2O43868 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
SLC28A2O43868 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SLC28A2O43868 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC28A2O43868 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.45■□□□□ 0.86
SLC28A2O43868 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.45■□□□□ 0.86
SLC28A2O43868 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SLC28A2O43868 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.45■□□□□ 0.86
SLC28A2O43868 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.45■□□□□ 0.86
SLC28A2O43868 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC28A2O43868 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SLC28A2O43868 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC28A2O43868 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.45■□□□□ 0.86
SLC28A2O43868 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SLC28A2O43868 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SLC28A2O43868 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms