Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tnfsf11O35235 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tnfsf11O35235 AC123834.2-201ENSMUST00000224038 2340 ntBASIC14.69□□□□□ -0.06
Tnfsf11O35235 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tnfsf11O35235 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC14.69□□□□□ -0.06
Tnfsf11O35235 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tnfsf11O35235 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Tnfsf11O35235 Gm10657-201ENSMUST00000193528 1031 ntBASIC14.69□□□□□ -0.06
Tnfsf11O35235 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC14.69□□□□□ -0.06
Tnfsf11O35235 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tnfsf11O35235 Gm9870-201ENSMUST00000063874 645 ntBASIC14.69□□□□□ -0.06
Tnfsf11O35235 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tnfsf11O35235 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tnfsf11O35235 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tnfsf11O35235 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Tnfsf11O35235 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tnfsf11O35235 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tnfsf11O35235 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Tnfsf11O35235 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
Tnfsf11O35235 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tnfsf11O35235 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tnfsf11O35235 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tnfsf11O35235 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tnfsf11O35235 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Tnfsf11O35235 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC14.68□□□□□ -0.06
Tnfsf11O35235 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC14.68□□□□□ -0.06
Tnfsf11O35235 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tnfsf11O35235 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tnfsf11O35235 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tnfsf11O35235 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tnfsf11O35235 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Tnfsf11O35235 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Tnfsf11O35235 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC14.67□□□□□ -0.06
Tnfsf11O35235 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tnfsf11O35235 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Tnfsf11O35235 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Tnfsf11O35235 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC14.67□□□□□ -0.06
Tnfsf11O35235 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tnfsf11O35235 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Tnfsf11O35235 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Tnfsf11O35235 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC14.67□□□□□ -0.06
Tnfsf11O35235 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tnfsf11O35235 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Tnfsf11O35235 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tnfsf11O35235 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tnfsf11O35235 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tnfsf11O35235 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Tnfsf11O35235 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tnfsf11O35235 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tnfsf11O35235 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC14.66□□□□□ -0.06
Tnfsf11O35235 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tnfsf11O35235 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Tnfsf11O35235 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tnfsf11O35235 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC14.66□□□□□ -0.06
Tnfsf11O35235 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Tnfsf11O35235 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Tnfsf11O35235 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC14.66□□□□□ -0.06
Tnfsf11O35235 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tnfsf11O35235 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC14.66□□□□□ -0.06
Tnfsf11O35235 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tnfsf11O35235 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Tnfsf11O35235 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tnfsf11O35235 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tnfsf11O35235 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tnfsf11O35235 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Tnfsf11O35235 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC14.66□□□□□ -0.06
Tnfsf11O35235 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC14.66□□□□□ -0.06
Tnfsf11O35235 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tnfsf11O35235 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tnfsf11O35235 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Tnfsf11O35235 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Tnfsf11O35235 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tnfsf11O35235 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Tnfsf11O35235 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tnfsf11O35235 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tnfsf11O35235 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tnfsf11O35235 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tnfsf11O35235 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tnfsf11O35235 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tnfsf11O35235 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tnfsf11O35235 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Tnfsf11O35235 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tnfsf11O35235 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tnfsf11O35235 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tnfsf11O35235 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Tnfsf11O35235 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
Tnfsf11O35235 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tnfsf11O35235 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfsf11O35235 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfsf11O35235 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfsf11O35235 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Tnfsf11O35235 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC14.64□□□□□ -0.07
Tnfsf11O35235 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfsf11O35235 Gm18755-201ENSMUST00000218030 1099 ntBASIC14.64□□□□□ -0.07
Tnfsf11O35235 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfsf11O35235 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfsf11O35235 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfsf11O35235 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfsf11O35235 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfsf11O35235 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms