Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDH17O14917 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.34■□□□□ 0.85
PCDH17O14917 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDH17O14917 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
PCDH17O14917 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDH17O14917 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDH17O14917 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDH17O14917 DUX4L2-201ENST00000561772 1275 ntBASIC20.34■□□□□ 0.85
PCDH17O14917 TPRG1LP1-201ENST00000598702 760 ntBASIC20.34■□□□□ 0.85
PCDH17O14917 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.34■□□□□ 0.85
PCDH17O14917 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDH17O14917 DUX4L6-201ENST00000626483 1275 ntBASIC20.34■□□□□ 0.85
PCDH17O14917 DUX4L1-201ENST00000627662 1275 ntBASIC20.34■□□□□ 0.85
PCDH17O14917 DUX4L8-201ENST00000629013 1275 ntBASIC20.34■□□□□ 0.85
PCDH17O14917 DUX4L3-201ENST00000630187 1275 ntBASIC20.34■□□□□ 0.85
PCDH17O14917 DUX4L7-201ENST00000630678 1275 ntBASIC20.34■□□□□ 0.85
PCDH17O14917 DUX4L5-201ENST00000630834 1275 ntBASIC20.34■□□□□ 0.85
PCDH17O14917 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDH17O14917 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.34■□□□□ 0.85
PCDH17O14917 FBXW4P1-201ENST00000426721 2239 ntBASIC20.34■□□□□ 0.85
PCDH17O14917 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDH17O14917 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
PCDH17O14917 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PCDH17O14917 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
PCDH17O14917 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.33■□□□□ 0.85
PCDH17O14917 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PCDH17O14917 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDH17O14917 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDH17O14917 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.33■□□□□ 0.85
PCDH17O14917 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PCDH17O14917 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PCDH17O14917 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDH17O14917 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDH17O14917 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PCDH17O14917 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDH17O14917 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDH17O14917 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
PCDH17O14917 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDH17O14917 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDH17O14917 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.32■□□□□ 0.84
PCDH17O14917 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.32■□□□□ 0.84
PCDH17O14917 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.32■□□□□ 0.84
PCDH17O14917 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
PCDH17O14917 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDH17O14917 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDH17O14917 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDH17O14917 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDH17O14917 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
PCDH17O14917 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDH17O14917 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
PCDH17O14917 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.31■□□□□ 0.84
PCDH17O14917 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDH17O14917 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.31■□□□□ 0.84
PCDH17O14917 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDH17O14917 KRT18P5-201ENST00000436075 1291 ntBASIC20.31■□□□□ 0.84
PCDH17O14917 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDH17O14917 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
PCDH17O14917 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDH17O14917 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDH17O14917 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDH17O14917 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDH17O14917 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PCDH17O14917 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDH17O14917 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PCDH17O14917 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDH17O14917 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PCDH17O14917 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.3■□□□□ 0.84
PCDH17O14917 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDH17O14917 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDH17O14917 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDH17O14917 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDH17O14917 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDH17O14917 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
PCDH17O14917 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDH17O14917 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDH17O14917 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
PCDH17O14917 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
PCDH17O14917 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDH17O14917 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDH17O14917 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDH17O14917 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
PCDH17O14917 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.29■□□□□ 0.84
PCDH17O14917 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDH17O14917 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.29■□□□□ 0.84
PCDH17O14917 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCDH17O14917 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.29■□□□□ 0.84
PCDH17O14917 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.29■□□□□ 0.84
PCDH17O14917 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.29■□□□□ 0.84
PCDH17O14917 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.29■□□□□ 0.84
PCDH17O14917 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.29■□□□□ 0.84
PCDH17O14917 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDH17O14917 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.29■□□□□ 0.84
PCDH17O14917 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
PCDH17O14917 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.29■□□□□ 0.84
PCDH17O14917 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDH17O14917 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDH17O14917 LINC01960-201ENST00000563759 1884 ntBASIC20.28■□□□□ 0.84
PCDH17O14917 AC009237.3-201ENST00000393279 1427 ntBASIC20.28■□□□□ 0.84
PCDH17O14917 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDH17O14917 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms